RNA–Protein interactions for RNA: ENST00000366496.6

NLRP3-203, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-203ENST00000366496 TRIM29Q14134 588 aa9.4□□□□□ -0.9
NLRP3-203ENST00000366496 CREB3L3Q68CJ9 461 aa9.4□□□□□ -0.9
NLRP3-203ENST00000366496 A1CFQ9NQ94 594 aaKnown RBP9.4□□□□□ -0.9
NLRP3-203ENST00000366496 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.9
NLRP3-203ENST00000366496 TECPR2O15040 1411 aa9.4□□□□□ -0.91
NLRP3-203ENST00000366496 SPATA31A3Q5VYP0 1347 aa9.4□□□□□ -0.91
NLRP3-203ENST00000366496 A6NNZ2 444 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 CCDC175P0C221 793 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 TUBB8Q3ZCM7 444 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 RASSF8Q8NHQ8 419 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 PAG1Q9NWQ8 432 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 ERICH2A1L162 156 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 CTAGE9A4FU28 777 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 KLHL33A6NCF5 533 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 IL15P40933 162 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 RWDD2BP57060 319 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 FANCCQ00597 558 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 STIM1Q13586 685 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 BEND6Q5SZJ8 279 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 RSRC2Q7L4I2 434 aaKnown RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 SYNE4Q8N205 404 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 NEK1Q96PY6 1258 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 CAPS2Q9BXY5 557 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 TMX4Q9H1E5 349 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 JCADQ9P266 1359 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 A0A0D9SFI3 127 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 BIN1O00499 593 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 TAF5LO75529 589 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 SNCBQ16143 134 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 TEX13AQ9BXU3 409 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 ETAA1Q9NY74 926 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 ZPR1O75312 459 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 KAT2BQ92831 832 aa9.39□□□□□ -0.91
NLRP3-203ENST00000366496 QTRT2Q9H974 415 aaKnown RBP9.39□□□□□ -0.91
NLRP3-203ENST00000366496 KDRP35968 1356 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 SLC3A2P08195 630 aaKnown RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 NAP1L1P55209 391 aaKnown RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 GNGT1P63211 74 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 U3KPZ7 1027 aaPredicted RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 LARGE1O95461 756 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 SLC8A1P32418 973 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 KRT32Q14532 448 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 SLC9C2Q5TAH2 1124 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 MSL3Q8N5Y2 521 aaKnown RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 TTC14Q96N46 770 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 CD248Q9HCU0 757 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 NEURL4Q96JN8 1562 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 EYA2O00167 538 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 SETSIPP0DME0 302 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 ITGA6P23229 1130 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 MCMDC2Q4G0Z9 681 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 RPUSD2Q8IZ73 545 aaKnown RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 CAGE1Q8TC20 777 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 LZTFL1Q9NQ48 299 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
NLRP3-203ENST00000366496 ZBTB1Q9Y2K1 713 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 STRCQ7RTU9 1775 aa9.38□□□□□ -0.91
NLRP3-203ENST00000366496 SASH1O94885 1247 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
NLRP3-203ENST00000366496 TRAF1Q13077 416 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 STK38Q15208 465 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 Q6ZUG5 572 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 SAAL1Q96ER3 474 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 L1RE1Q9UN81 338 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 C1orf167Q5SNV9 1468 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 ZNF213O14771 459 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 RXRAP19793 462 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 ME3Q16798 604 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 ADCK5Q3MIX3 580 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 MRPS27Q92552 414 aaKnown RBP9.37□□□□□ -0.91
NLRP3-203ENST00000366496 ITFG2Q969R8 447 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 DBNLQ9UJU6 430 aaKnown RBP9.37□□□□□ -0.91
NLRP3-203ENST00000366496 SAMM50Q9Y512 469 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 OPA1O60313 960 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 CUTAO60888 179 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 TRIM65Q6PJ69 517 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 CCDC121Q6ZUS5 278 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 IGSF22Q8N9C0 903 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 MIGA1Q8NAN2 632 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 PIGBQ92521 554 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 WDR24Q96S15 920 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 NAPBQ9H115 298 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 KLC4Q9NSK0 619 aa9.37□□□□□ -0.91
NLRP3-203ENST00000366496 MCM8Q9UJA3 840 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms