RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 CDC37L1Q7L3B6 337 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 ARMCX6Q7L4S7 300 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 UBE3DQ7Z6J8 389 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 C12orf40Q86WS4 652 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 ZSCAN29Q8IWY8 852 aaPredicted RBP4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 SPACA3Q8IXA5 215 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 ELMO3Q96BJ8 720 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 OSBPL7Q9BZF2 842 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 PCDHA4Q9UN74 947 aa4.68□□□□□ -1.66
RNU4-42P-201ENST00000364738 CELA3AP09093 270 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 BMP6P22004 513 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 ZBTB37Q5TC79 503 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 PCNX4Q63HM2 1172 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 ALG1LQ6GMV1 187 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 FAM214BQ7L5A3 538 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 ASB11Q8WXH4 323 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 PRDM7Q9NQW5 492 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 PRDM5Q9NQX1 630 aaPredicted RBP4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 SPG7Q9UQ90 795 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 SNX11Q9Y5W9 270 aa4.67□□□□□ -1.66
RNU4-42P-201ENST00000364738 PRAMEF27A3QJZ7 478 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 IGF2BP3O00425 579 aaKnown RBP eCLIP4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 GIPC1O14908 333 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 FARP2O94887 1054 aaPredicted RBP4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 RING1Q06587 406 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 RASIP1Q5U651 963 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 KCT2Q8NC54 265 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 ASB16Q96NS5 453 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 WWC3Q9ULE0 1092 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 IVNS1ABPQ9Y6Y0 642 aa4.66□□□□□ -1.66
RNU4-42P-201ENST00000364738 LRIG2O94898 1065 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 USP17L7P0C7H9 530 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 CLCN7P51798 805 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZP2Q05996 745 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZNF124Q15973 351 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 PKN1Q16512 942 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 NKPD1Q17RQ9 610 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 SCARA3Q6AZY7 606 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 FLAD1Q8NFF5 587 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZNF507Q8TCN5 953 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 ANKRD24Q8TF21 1146 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 TMEM40Q8WWA1 233 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 FOXQ1Q9C009 403 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 C12orf49Q9H741 205 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 FAM8A1Q9UBU6 413 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 CYP8B1Q9UNU6 501 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 TTF2Q9UNY4 1162 aaKnown RBP4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 MAPK8IP1Q9UQF2 711 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 PITPNM2Q9BZ72 1349 aa4.65□□□□□ -1.67
RNU4-42P-201ENST00000364738 FAM155AB1AL88 458 aaPredicted RBP4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 EOMESO95936 686 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 INPP5AQ14642 412 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 LRFN4Q6PJG9 635 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 HDXQ7Z353 690 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZSWIM9Q86XI8 627 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 KSR1Q8IVT5 923 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 PLPPR2Q96GM1 343 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 MIPEPQ99797 713 aa4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 TPX2Q9ULW0 747 aaKnown RBP4.64□□□□□ -1.67
RNU4-42P-201ENST00000364738 LRRC10BA6NIK2 292 aa4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 SLITRK5O94991 958 aa4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 P4HBP07237 508 aaKnown RBP4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 ETF1P62495 437 aaKnown RBP4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 PTPN11Q06124 597 aaPredicted RBP4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 KCNMB1Q16558 191 aa4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 WIPI1Q5MNZ9 446 aaPredicted RBP4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 MFSD4AQ8N468 514 aa4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 GAL3ST3Q96A11 431 aa4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 FBRSQ9HAH7 460 aa4.63□□□□□ -1.67
RNU4-42P-201ENST00000364738 LDHBP07195 334 aaKnown RBP4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 KCNA1Q09470 495 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 SFRP5Q5T4F7 317 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 TTBK2Q6IQ55 1244 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 SV2BQ7L1I2 683 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 CYFIP1Q7L576 1253 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 SLC38A3Q99624 504 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 WNT10AQ9GZT5 417 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 CARS2Q9HA77 564 aaKnown RBP4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 CTNND2Q9UQB3 1225 aa4.62□□□□□ -1.67
RNU4-42P-201ENST00000364738 DBX1A6NMT0 343 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 PRR33A8MZF0 331 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 LMNB1P20700 586 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 EIF4BP23588 611 aaKnown RBP4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 FGD1P98174 961 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 SLBPQ14493 270 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 NKG7Q16617 165 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 CDKAL1Q5VV42 579 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 HSPA12BQ96MM6 686 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 FRMD6Q96NE9 622 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 ATP13A1Q9HD20 1204 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 FAM53CQ9NYF3 392 aa4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZNF503-AS2A6NEH8 195 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 H3BS24 57 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 ZNF865P0CJ78 1059 aaPredicted RBP4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 GNA15P30679 374 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 CAP2P40123 477 aa4.6□□□□□ -1.67
RNU4-42P-201ENST00000364738 AFMP43652 599 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms