RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SCP2P22307 547 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 GPTP24298 496 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 CCT6AP40227 531 aaKnown RBP14.41□□□□□ -0.1
VAMP1-201ENST00000361716 AFMP43652 599 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 STIM1Q13586 685 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 KBTBD3Q8NAB2 608 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 INCENPQ9NQS7 918 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 GOLGA6AQ9NYA3 693 aa14.41□□□□□ -0.1
VAMP1-201ENST00000361716 MYO1FO00160 1098 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 SRGAP2O75044 1071 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 ABL1P00519 1130 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 PTPN12Q05209 780 aaKnown RBP14.4□□□□□ -0.1
VAMP1-201ENST00000361716 CCDC102BQ68D86 513 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 TC2NQ8N9U0 490 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 STAMQ92783 540 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 RUFY1Q96T51 708 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 SLF1Q9BQI6 1058 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 RTEL1Q9NZ71 1219 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 HMGB1P09429 215 aaKnown RBP14.4□□□□□ -0.1
VAMP1-201ENST00000361716 ATP5JP18859 108 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 GNGT1P63211 74 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 SF3A3Q12874 501 aaKnown RBP eCLIP14.4□□□□□ -0.1
VAMP1-201ENST00000361716 CCDC57Q2TAC2 916 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 RPAINQ86UA6 219 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 OTUD6BQ8N6M0 293 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 SLC26A6Q9BXS9 759 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 USP54Q70EL1 1684 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 hCG_1642624A0A1W2PR95 340 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 TEX33O43247 280 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 A1BGP04217 495 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 GGCXP38435 758 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 CNPY4Q8N129 248 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 IQUBQ8NA54 791 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 KAT14Q9H8E8 782 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 HDAC6Q9UBN7 1215 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 DENND2AQ9ULE3 1009 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 AXIN2Q9Y2T1 843 aa14.4□□□□□ -0.1
VAMP1-201ENST00000361716 NEBLO76041 1014 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 CDC27P30260 824 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 AMOTQ4VCS5 1084 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 KIRREL3Q8IZU9 778 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 ZNF526Q8TF50 670 aaPredicted RBP14.39□□□□□ -0.11
VAMP1-201ENST00000361716 NDUFAB1O14561 156 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 KCNJ6P48051 423 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 ACTN3Q08043 901 aaPredicted RBP14.39□□□□□ -0.11
VAMP1-201ENST00000361716 RBL2Q08999 1139 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 RAD9BQ6WBX8 426 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 HELBQ8NG08 1087 aaPredicted RBP14.39□□□□□ -0.11
VAMP1-201ENST00000361716 RASSF8Q8NHQ8 419 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 NUP88Q99567 741 aaPredicted RBP14.39□□□□□ -0.11
VAMP1-201ENST00000361716 NAPGQ99747 312 aaPredicted RBP14.39□□□□□ -0.11
VAMP1-201ENST00000361716 CD248Q9HCU0 757 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 KDRP35968 1356 aa14.39□□□□□ -0.11
VAMP1-201ENST00000361716 UBE2Q2LH0YL09 131 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 CARMIL3Q8ND23 1372 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 MROH7-TTC4A0A0A0MT08 1334 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 IKBKBO14920 756 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 TATP17735 454 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-201ENST00000361716 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
VAMP1-201ENST00000361716 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 KCTD16Q68DU8 428 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 METTL22Q9BUU2 404 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-201ENST00000361716 INTS13Q9NVM9 706 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 KAT6BQ8WYB5 2073 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 KIF28PB7ZC32 967 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
VAMP1-201ENST00000361716 ADORA1P30542 326 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 KCNB2Q92953 911 aa14.38□□□□□ -0.11
VAMP1-201ENST00000361716 B4E1Z4 1266 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 M0R2C6 588 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 DNA2P51530 1060 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 TTLL7Q6ZT98 887 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 PSMB7Q99436 277 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 A0A1W2PQ27 194 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 A0A1W2PQ64 194 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 A0A1W2PQD8 194 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 NF2P35240 595 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
VAMP1-201ENST00000361716 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 NOC3LQ8WTT2 800 aaKnown RBP14.37□□□□□ -0.11
VAMP1-201ENST00000361716 OSBP2Q969R2 916 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 LLPHQ9BRT6 129 aaKnown RBP14.37□□□□□ -0.11
VAMP1-201ENST00000361716 KCNJ14Q9UNX9 436 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 GOLGB1Q14789 3259 aaKnown RBP14.37□□□□□ -0.11
VAMP1-201ENST00000361716 CASP14P31944 242 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 FMR1Q06787 632 aaKnown RBP eCLIP14.37□□□□□ -0.11
VAMP1-201ENST00000361716 FCHSD1Q86WN1 690 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 SCLT1Q96NL6 688 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.37□□□□□ -0.11
VAMP1-201ENST00000361716 MED4Q9NPJ6 270 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 FMN2Q9NZ56 1722 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 TRIM10Q9UDY6 481 aa14.37□□□□□ -0.11
VAMP1-201ENST00000361716 RNF113AO15541 343 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms