RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 MAP3K4Q9Y6R4 1608 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 RXRBP28702 533 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 MAP3K9P80192 1104 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 IFNL3Q8IZI9 196 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 STAP2Q9UGK3 403 aa15.14■□□□□ 0.01
LDB3-202ENST00000361373 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 ATP10DQ9P241 1426 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 A0A1B0GVL5 298 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 CSADQ9Y600 493 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 GALNT17Q6IS24 598 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 GPHNQ9NQX3 736 aaPredicted RBP15.13■□□□□ 0.01
LDB3-202ENST00000361373 ADGRL3Q9HAR2 1447 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 PDE4DQ08499 809 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 ZNF654Q8IZM8 581 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
LDB3-202ENST00000361373 IKBKGQ9Y6K9 419 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 CETN3O15182 167 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 STX17P56962 302 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 CDAN1Q8IWY9 1227 aa15.13■□□□□ 0.01
LDB3-202ENST00000361373 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
LDB3-202ENST00000361373 IRX3P78415 501 aaPredicted RBP15.12■□□□□ 0.01
LDB3-202ENST00000361373 WDR44Q5JSH3 913 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 DNM3Q9UQ16 869 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 ZBTB1Q9Y2K1 713 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 SPATA31A3Q5VYP0 1347 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 CALUO43852 315 aaPredicted RBP15.12■□□□□ 0.01
LDB3-202ENST00000361373 TUBBP07437 444 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 TCP10Q12799 353 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 PABPC4Q13310 644 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDB3-202ENST00000361373 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 CEP112Q8N8E3 955 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 CCDC17Q96LX7 622 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 TXKP42681 527 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 NT5C2P49902 561 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 HSP90AA4PQ58FG1 418 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 NT5C3AQ9H0P0 336 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 SLC5A4Q9NY91 659 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 GYG1P46976 350 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 TSNARE1Q96NA8 513 aa15.12■□□□□ 0.01
LDB3-202ENST00000361373 CTAGE9A4FU28 777 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 ATP2A1O14983 1001 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 CCDC155Q8N6L0 562 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 CCDC77Q9BR77 488 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 AZI2Q9H6S1 392 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.01
LDB3-202ENST00000361373 LMAN1P49257 510 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 SP4Q02446 784 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 STRN3Q13033 797 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 BCS1LQ9Y276 419 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 RRP9O43818 475 aaKnown RBP15.11■□□□□ 0.01
LDB3-202ENST00000361373 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
LDB3-202ENST00000361373 SNX29Q8TEQ0 813 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 GTF3C6Q969F1 213 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 TSGA10Q9BZW7 698 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 CLSTN2Q9H4D0 955 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 GREM2Q9H772 168 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 IFNKQ9P0W0 207 aa15.11■□□□□ 0.01
LDB3-202ENST00000361373 BCAMP50895 628 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 CALCRLQ16602 461 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.1■□□□□ 0.01
LDB3-202ENST00000361373 FAM212AQ96EL1 285 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 NSMFQ6X4W1 530 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 MICALCLQ6ZW33 695 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 NLRX1Q86UT6 975 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 HSPD1P10809 573 aaKnown RBP15.1■□□□□ 0.01
LDB3-202ENST00000361373 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.01
LDB3-202ENST00000361373 PLIN2Q99541 437 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 OSBPL3Q9H4L5 887 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 DDAH1O94760 285 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 BMS1Q14692 1282 aaKnown RBP15.1■□□□□ 0.01
LDB3-202ENST00000361373 BRINP3Q76B58 766 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
LDB3-202ENST00000361373 NOD1Q9Y239 953 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 A2ML1A8K2U0 1454 aa15.1■□□□□ 0.01
LDB3-202ENST00000361373 TSPOAP1O95153 1857 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 PABPN1LA6NDY0 278 aaKnown RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 PTGS1P23219 599 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 TBC1D8BQ0IIM8 1120 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 ZYXQ15942 572 aaKnown RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 LRRC24Q50LG9 513 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 CLEC4GQ6UXB4 293 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 LEO1Q8WVC0 666 aaPredicted RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 NOC4LQ9BVI4 516 aaKnown RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 DNM2P50570 870 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 SLC8A3P57103 927 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 SNX16P57768 344 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 CPXCR1Q8N123 301 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 CCDC97Q96F63 343 aaPredicted RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 IWS1Q96ST2 819 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 NUP58Q9BVL2 599 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms