RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GGA1Q9UJY5 639 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 ZNF365Q70YC5 407 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 RSPH3Q86UC2 560 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 HSPA8P11142 646 aaKnown RBP10.76□□□□□ -0.69
CUX1-203ENST00000360264 ISM2Q6H9L7 571 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 DNM3Q9UQ16 869 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 CTNND2Q9UQB3 1225 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 PPFIA1Q13136 1202 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 KIF22Q14807 665 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 ADGRF5Q8IZF2 1346 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 MGEA5O60502 916 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 RASSF2P50749 326 aa10.76□□□□□ -0.69
CUX1-203ENST00000360264 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 TERF1P54274 439 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 SLC9C1Q4G0N8 1177 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 FBXO31Q5XUX0 539 aaPredicted RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 PDZD4Q76G19 769 aaPredicted RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 NOC4LQ9BVI4 516 aaKnown RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 UBLCP1Q8WVY7 318 aaPredicted RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 AOPEPQ8N6M6 819 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 TRPM2O94759 1503 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 TPCN1Q9ULQ1 816 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 HIBADHP31937 336 aaKnown RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 CCDC84Q86UT8 332 aaPredicted RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 FAM8A1Q9UBU6 413 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 SETSIPP0DME0 302 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 SLC1A4P43007 532 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 BAG1Q99933 345 aaPredicted RBP10.75□□□□□ -0.69
CUX1-203ENST00000360264 STK32BQ9NY57 414 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 PDE8AO60658 829 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 NOLC1Q14978 699 aaKnown RBP eCLIP10.75□□□□□ -0.693e-6■■□□□ 12.3
CUX1-203ENST00000360264 C8orf74Q6P047 294 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 CEP57Q86XR8 500 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 OTUD6AQ7L8S5 288 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 CASC4Q6P4E1 433 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 GUCA1BQ9UMX6 200 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 HOXB7P09629 217 aa10.75□□□□□ -0.69
CUX1-203ENST00000360264 OATP04181 439 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 ANKRD44Q8N8A2 993 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 EIF6P56537 245 aaKnown RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 C19orf44Q9H6X5 657 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 IRX3P78415 501 aaPredicted RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 GKAP1Q5VSY0 366 aaPredicted RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 GALNT17Q6IS24 598 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 ABCC1P33527 1531 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 TSHZ3Q63HK5 1081 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 PPP1R21Q6ZMI0 780 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 GPATCH11Q8N954 259 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 SH3TC1Q8TE82 1336 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 CCDC169A6NNP5 214 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 KRT25Q7Z3Z0 450 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 MLKLQ8NB16 471 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 TBC1D8BQ0IIM8 1120 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 MRPL44Q9H9J2 332 aaKnown RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 DNAJC25Q9H1X3 360 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 PRPF6O94906 941 aaKnown RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 TRIM37O94972 964 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
CUX1-203ENST00000360264 DENND2CQ68D51 928 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 SLFN12Q8IYM2 578 aa10.74□□□□□ -0.69
CUX1-203ENST00000360264 TYW5A2RUC4 315 aaKnown RBP10.73□□□□□ -0.69
CUX1-203ENST00000360264 CEP85LQ5SZL2 805 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 AFAP1L1Q8TED9 768 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 NIM1KQ8IY84 436 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 KCNH3Q9ULD8 1083 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 KRT9P35527 623 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 ARHGAP25P42331 645 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 ANO1Q5XXA6 986 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 CPSF2Q9P2I0 782 aaKnown RBP10.73□□□□□ -0.69
CUX1-203ENST00000360264 MROH5Q6ZUA9 1318 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 MAP3K21Q5TCX8 1036 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
CUX1-203ENST00000360264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.73□□□□□ -0.69
CUX1-203ENST00000360264 SYNRGQ9UMZ2 1314 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 THOC2Q8NI27 1593 aaKnown RBP10.73□□□□□ -0.69
CUX1-203ENST00000360264 PPFIA2O75334 1257 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 PAK1Q13153 545 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 TTC31Q49AM3 519 aaPredicted RBP10.73□□□□□ -0.69
CUX1-203ENST00000360264 REXO1Q8N1G1 1221 aaKnown RBP10.73□□□□□ -0.69
CUX1-203ENST00000360264 CHURC1Q8WUH1 139 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 AK2P54819 239 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 CTTNBP2Q8WZ74 1663 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 RAPGEF6Q8TEU7 1601 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 CALCRLQ16602 461 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 HVCN1Q96D96 273 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 AFG3L2Q9Y4W6 797 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 A0A1B0GUA9 196 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 GNPATO15228 680 aa10.73□□□□□ -0.69
CUX1-203ENST00000360264 NAPGQ99747 312 aaPredicted RBP10.73□□□□□ -0.69
CUX1-203ENST00000360264 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms