RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 TBC1D9Q6ZT07 1266 aa28.42■■■□□ 2.14
YIF1A-201ENST00000359461 U2AF1L4Q8WU68 220 aaKnown RBP28.42■■■□□ 2.14
YIF1A-201ENST00000359461 PNMA6EA0A0J9YXQ4 647 aa28.41■■■□□ 2.14
YIF1A-201ENST00000359461 TNPO2O14787 897 aaKnown RBP28.41■■■□□ 2.14
YIF1A-201ENST00000359461 GNAI2P04899 355 aa28.41■■■□□ 2.14
YIF1A-201ENST00000359461 MCAMP43121 646 aa28.41■■■□□ 2.14
YIF1A-201ENST00000359461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.41■■■□□ 2.14
YIF1A-201ENST00000359461 PLXNB2O15031 1838 aa28.41■■■□□ 2.14
YIF1A-201ENST00000359461 CCER2I3L3R5 266 aa28.4■■■□□ 2.14
YIF1A-201ENST00000359461 FAM110CQ1W6H9 321 aa28.4■■■□□ 2.14
YIF1A-201ENST00000359461 ATF7IPQ6VMQ6 1270 aa28.4■■■□□ 2.14
YIF1A-201ENST00000359461 TBC1D2Q9BYX2 928 aa28.4■■■□□ 2.14
YIF1A-201ENST00000359461 PNMA3Q9UL41 463 aa28.4■■■□□ 2.14
YIF1A-201ENST00000359461 TNNQ9UQP3 1299 aa28.4■■■□□ 2.14
YIF1A-201ENST00000359461 IPO8O15397 1037 aaKnown RBP28.39■■■□□ 2.14
YIF1A-201ENST00000359461 INHAP05111 366 aa28.39■■■□□ 2.14
YIF1A-201ENST00000359461 ELNP15502 786 aa28.39■■■□□ 2.14
YIF1A-201ENST00000359461 GORABQ5T7V8 394 aa28.39■■■□□ 2.14
YIF1A-201ENST00000359461 DPF3Q92784 378 aa28.39■■■□□ 2.14
YIF1A-201ENST00000359461 HTATIP2Q9BUP3 242 aa28.39■■■□□ 2.14
YIF1A-201ENST00000359461 SZT2Q5T011 3432 aa28.39■■■□□ 2.14
YIF1A-201ENST00000359461 FARP2O94887 1054 aaPredicted RBP28.38■■■□□ 2.13
YIF1A-201ENST00000359461 SGPL1O95470 568 aa28.38■■■□□ 2.13
YIF1A-201ENST00000359461 CHRDL2Q6WN34 429 aa28.38■■■□□ 2.13
YIF1A-201ENST00000359461 ANKRD13CQ8N6S4 541 aa28.38■■■□□ 2.13
YIF1A-201ENST00000359461 RAI14Q9P0K7 980 aa28.38■■■□□ 2.13
YIF1A-201ENST00000359461 UQCRFS1P1P0C7P4 283 aa28.37■■■□□ 2.13
YIF1A-201ENST00000359461 CAPN2P17655 700 aa28.37■■■□□ 2.13
YIF1A-201ENST00000359461 CAP2P40123 477 aa28.37■■■□□ 2.13
YIF1A-201ENST00000359461 RRP1BQ14684 758 aaKnown RBP28.37■■■□□ 2.13
YIF1A-201ENST00000359461 ZNF280CQ8ND82 737 aa28.37■■■□□ 2.13
YIF1A-201ENST00000359461 PAK6Q9NQU5 681 aaPredicted RBP28.37■■■□□ 2.13
YIF1A-201ENST00000359461 HERC5Q9UII4 1024 aaKnown RBP28.37■■■□□ 2.13
YIF1A-201ENST00000359461 SPP2Q13103 211 aa28.36■■■□□ 2.13
YIF1A-201ENST00000359461 TEX11Q8IYF3 940 aa28.36■■■□□ 2.13
YIF1A-201ENST00000359461 PRO3102Q9H379 93 aa28.36■■■□□ 2.13
YIF1A-201ENST00000359461 G3BP1Q13283 466 aaKnown RBP eCLIP28.35■■■□□ 2.134e-6■□□□□ 8.7
YIF1A-201ENST00000359461 SH3D19Q5HYK7 790 aa28.35■■■□□ 2.13
YIF1A-201ENST00000359461 COA7Q96BR5 231 aa28.35■■■□□ 2.13
YIF1A-201ENST00000359461 GPR108Q9NPR9 543 aa28.35■■■□□ 2.13
YIF1A-201ENST00000359461 BCAR3O75815 825 aa28.34■■■□□ 2.13
YIF1A-201ENST00000359461 GCLCP48506 637 aaPredicted RBP28.34■■■□□ 2.13
YIF1A-201ENST00000359461 HMGCS2P54868 508 aa28.34■■■□□ 2.13
YIF1A-201ENST00000359461 SH3RF3Q8TEJ3 882 aaPredicted RBP28.34■■■□□ 2.13
YIF1A-201ENST00000359461 LRP2BPQ9P2M1 347 aa28.34■■■□□ 2.13
YIF1A-201ENST00000359461 RBM27Q9P2N5 1060 aaKnown RBP28.34■■■□□ 2.13
YIF1A-201ENST00000359461 USP17L5A8MUK1 530 aa28.33■■■□□ 2.13
YIF1A-201ENST00000359461 POLA2Q14181 598 aa28.33■■■□□ 2.13
YIF1A-201ENST00000359461 CRISPLD2Q9H0B8 497 aa28.33■■■□□ 2.13
YIF1A-201ENST00000359461 PABPC4Q13310 644 aaKnown RBP eCLIP28.32■■■□□ 2.122e-6■■■■□ 20.2
YIF1A-201ENST00000359461 DHX36Q9H2U1 1008 aaKnown RBP28.32■■■□□ 2.12
YIF1A-201ENST00000359461 MYH1P12882 1939 aa28.31■■■□□ 2.12
YIF1A-201ENST00000359461 ZBTB7BO15156 539 aaPredicted RBP28.31■■■□□ 2.12
YIF1A-201ENST00000359461 METTL16Q86W50 562 aaKnown RBP28.31■■■□□ 2.12
YIF1A-201ENST00000359461 FRAT1Q92837 279 aaPredicted RBP28.31■■■□□ 2.12
YIF1A-201ENST00000359461 CLUAP1Q96AJ1 413 aa28.31■■■□□ 2.12
YIF1A-201ENST00000359461 DEFB118Q96PH6 123 aa28.31■■■□□ 2.12
YIF1A-201ENST00000359461 WDR18Q9BV38 432 aa28.31■■■□□ 2.12
YIF1A-201ENST00000359461 ASCC2Q9H1I8 757 aaPredicted RBP28.31■■■□□ 2.12
YIF1A-201ENST00000359461 PI4KBQ9UBF8 816 aa28.31■■■□□ 2.12
YIF1A-201ENST00000359461 NR2E3Q9Y5X4 410 aa28.31■■■□□ 2.12
YIF1A-201ENST00000359461 PPP4CP60510 307 aa28.3■■■□□ 2.12
YIF1A-201ENST00000359461 TNNI3KQ59H18 835 aa28.3■■■□□ 2.12
YIF1A-201ENST00000359461 NAA16Q6N069 864 aaPredicted RBP28.3■■■□□ 2.12
YIF1A-201ENST00000359461 NOL10Q9BSC4 688 aaKnown RBP28.3■■■□□ 2.12
YIF1A-201ENST00000359461 DNAJC18Q9H819 358 aa28.3■■■□□ 2.12
YIF1A-201ENST00000359461 AS3MTQ9HBK9 375 aa28.3■■■□□ 2.12
YIF1A-201ENST00000359461 AATFQ9NY61 560 aaKnown RBP eCLIP28.3■■■□□ 2.12
YIF1A-201ENST00000359461 FPGT-TNNI3KV9GXZ4 949 aa28.3■■■□□ 2.12
YIF1A-201ENST00000359461 IGSF3O75054 1194 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 PLCG2P16885 1265 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 ADGRA1Q86SQ6 560 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 TMEM57Q8N5G2 664 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 SSH3Q8TE77 659 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 ZNF512BQ96KM6 892 aaPredicted RBP28.29■■■□□ 2.12
YIF1A-201ENST00000359461 DBNDD2Q9BQY9 259 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 MORF4L1Q9UBU8 362 aa28.29■■■□□ 2.12
YIF1A-201ENST00000359461 FLT1P17948 1338 aa28.28■■■□□ 2.12
YIF1A-201ENST00000359461 BAG3O95817 575 aa28.28■■■□□ 2.12
YIF1A-201ENST00000359461 SNRKQ9NRH2 765 aa28.28■■■□□ 2.12
YIF1A-201ENST00000359461 GJD2Q9UKL4 321 aa28.28■■■□□ 2.12
YIF1A-201ENST00000359461 DDX60LQ5H9U9 1706 aaKnown RBP28.28■■■□□ 2.12
YIF1A-201ENST00000359461 HMGCRP04035 888 aa28.27■■■□□ 2.12
YIF1A-201ENST00000359461 CYP2E1P05181 493 aaPredicted RBP28.27■■■□□ 2.12
YIF1A-201ENST00000359461 ASNSP08243 561 aa28.27■■■□□ 2.12
YIF1A-201ENST00000359461 TTC39AQ5SRH9 613 aa28.27■■■□□ 2.12
YIF1A-201ENST00000359461 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.27■■■□□ 2.129e-6■■■■■ 32.4
YIF1A-201ENST00000359461 TAOK2Q9UL54 1235 aa28.27■■■□□ 2.12
YIF1A-201ENST00000359461 TFRCP02786 760 aaKnown RBP28.26■■■□□ 2.11
YIF1A-201ENST00000359461 JAG1P78504 1218 aa28.26■■■□□ 2.11
YIF1A-201ENST00000359461 MTMR2Q13614 643 aa28.26■■■□□ 2.11
YIF1A-201ENST00000359461 CCDC158Q5M9N0 1113 aa28.26■■■□□ 2.11
YIF1A-201ENST00000359461 HOXA7P31268 230 aaPredicted RBP28.25■■■□□ 2.11
YIF1A-201ENST00000359461 BACE1P56817 501 aa28.25■■■□□ 2.11
YIF1A-201ENST00000359461 ZKSCAN2Q63HK3 967 aa28.25■■■□□ 2.11
YIF1A-201ENST00000359461 TGFBRAP1Q8WUH2 860 aa28.25■■■□□ 2.11
YIF1A-201ENST00000359461 GINM1Q9NU53 330 aa28.25■■■□□ 2.11
YIF1A-201ENST00000359461 ATP8B2P98198 1209 aa28.24■■■□□ 2.11
YIF1A-201ENST00000359461 MAPKAPK5Q8IW41 473 aa28.24■■■□□ 2.11
YIF1A-201ENST00000359461 FOXP4Q8IVH2 680 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms