RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 FTOQ9C0B1 505 aaKnown RBP eCLIP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 KCNQ5Q9NR82 932 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 ZSWIM5Q9P217 1185 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 HPS5Q9UPZ3 1129 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 PPEF1O14829 653 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 PFKFB2O60825 505 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 ADD1P35611 737 aaKnown RBP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 TRDNQ13061 729 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 CLEC17AQ6ZS10 378 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 TBC1D16Q8TBP0 767 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 PANK2Q9BZ23 570 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 ALDH8A1Q9H2A2 487 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-202ENST00000359366 GGA1Q9UJY5 639 aa5.97□□□□□ -1.45
ATXN3-202ENST00000359366 TNS1Q9HBL0 1735 aaKnown RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 USP17L12C9JPN9 530 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 USP17L21D6R901 530 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 NMT2O60551 498 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 KIF20AO95235 890 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 USP17L8P0C7I0 530 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 SRGNP10124 158 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 IRX3P78415 501 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 PPARAQ07869 468 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 TMEM67Q5HYA8 995 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 NFXL1Q6ZNB6 911 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 NLGN1Q8N2Q7 840 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 FAM184AQ8NB25 1140 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 RGS22Q8NE09 1264 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 SH3RF3Q8TEJ3 882 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 PHKBQ93100 1093 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 CD209Q9NNX6 404 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 SAP30BPQ9UHR5 308 aaKnown RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 PARP3Q9Y6F1 533 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 IFIT3O14879 490 aaKnown RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 LDHBP07195 334 aaKnown RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 FDPSP14324 419 aaKnown RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 CDC27P30260 824 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 GTF2IP78347 998 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 FAM47AQ5JRC9 791 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 AKNAD1Q5T1N1 836 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 MFSD6Q6ZSS7 791 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 ZNF804AQ7Z570 1209 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 TDRD7Q8NHU6 1098 aaKnown RBP5.96□□□□□ -1.46
ATXN3-202ENST00000359366 CAMKK2Q96RR4 588 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 NACAP1Q9BZK3 213 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 TMEM63CQ9P1W3 806 aa5.96□□□□□ -1.46
ATXN3-202ENST00000359366 COL11A2P13942 1736 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 hCG_1642624A0A1W2PR95 340 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 H3BQV1 296 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 SH2B2O14492 632 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 RANBP6O60518 1105 aaKnown RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 HOXB1P14653 301 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 SLC15A2Q16348 729 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 MFSD14BQ5SR56 506 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 L1TD1Q5T7N2 865 aaKnown RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 IFFO2Q5TF58 517 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 CTR9Q6PD62 1173 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 C2CD5Q86YS7 1000 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 SLC44A5Q8NCS7 719 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 IGDCC4Q8TDY8 1250 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 TRIM44Q96DX7 344 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 DYNLL2Q96FJ2 89 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 BRIP1Q9BX63 1249 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 AGXT2Q9BYV1 514 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 LY9Q9HBG7 655 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 ANGEL1Q9UNK9 670 aaKnown RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 LEMD3Q9Y2U8 911 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 SYCE3A1L190 88 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 BBOX1O75936 387 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 SLURP2P0DP57 97 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 HOXA10P31260 410 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-202ENST00000359366 SCNN1DP51172 638 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 ALX1Q15699 326 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 KLHL40Q2TBA0 621 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 MAPKAPK5Q8IW41 473 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 TGFBRAP1Q8WUH2 860 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 NUP133Q8WUM0 1156 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 DBNDD1Q9H9R9 158 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 MCM9Q9NXL9 1143 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 MTMR7Q9Y216 660 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 PCDHAC2Q9Y5I4 1007 aa5.95□□□□□ -1.46
ATXN3-202ENST00000359366 CCDC88AQ3V6T2 1871 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 CPLX1O14810 134 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ATP2B4P23634 1241 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 SETQ01105 290 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ZSCAN23Q3MJ62 389 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 APOA5Q6Q788 366 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 DPP8Q6V1X1 898 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 MPNDQ8N594 471 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 SMARCC2Q8TAQ2 1214 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 PIBF1Q8WXW3 757 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 ZNF274Q96GC6 653 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 L3MBTL3Q96JM7 780 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 CRAMP1Q96RY5 1269 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 DCP1AQ9NPI6 582 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 TMEM51Q9NW97 253 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 SLX4Q8IY92 1834 aa5.94□□□□□ -1.46
ATXN3-202ENST00000359366 KLRG2A4D1S0 409 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-202ENST00000359366 GOLGA6L3A6NEY3 463 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms