RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
UBE2D3-206ENST00000357194 API5Q9BZZ5 524 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-206ENST00000357194 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
UBE2D3-206ENST00000357194 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-206ENST00000357194 AKAP2Q9Y2D5 859 aa12.65□□□□□ -0.38
UBE2D3-206ENST00000357194 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 ATAD5Q96QE3 1844 aa12.64□□□□□ -0.39
UBE2D3-206ENST00000357194 A0A1W2PPC1 479 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 SRGAP3O43295 1099 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 LDHCP07864 332 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 GCLCP48506 637 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 HMGCS2P54868 508 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 GSTO1P78417 241 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 NECAB2Q7Z6G3 386 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.63□□□□□ -0.398e-9■■□□□ 13.6
UBE2D3-206ENST00000357194 STAP2Q9UGK3 403 aa12.63□□□□□ -0.39
UBE2D3-206ENST00000357194 ALPK3Q96L96 1907 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 LOC285556D6RIA3 1793 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 MAP4K4O95819 1239 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 CAP2P40123 477 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 PABPC4Q13310 644 aaKnown RBP eCLIP12.62□□□□□ -0.394e-7■■■■□ 24.1
UBE2D3-206ENST00000357194 RRP1BQ14684 758 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 TBC1D2Q9BYX2 928 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 ASCC2Q9H1I8 757 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 RAI14Q9P0K7 980 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 GJD2Q9UKL4 321 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 LAMA3Q16787 3333 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
UBE2D3-206ENST00000357194 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 SOX1O00570 391 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 HMGCRP04035 888 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 GNAI3P08754 354 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 MTX1Q13505 466 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 SH3D19Q5HYK7 790 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-206ENST00000357194 COL6A3P12111 3177 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 TRIM32Q13049 653 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 AS3MTQ9HBK9 375 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 PI4KBQ9UBF8 816 aa12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 HERC5Q9UII4 1024 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-206ENST00000357194 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 MCAMP43121 646 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 RARSP54136 660 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 C7orf61Q8IZ16 206 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 ARHGAP45Q92619 1136 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 GDF15Q99988 308 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 NBPF3Q9H094 633 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 MORF4L1Q9UBU8 362 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 PLXNB2O15031 1838 aa12.59□□□□□ -0.39
UBE2D3-206ENST00000357194 CYP2B6P20813 491 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 BMP8BP34820 402 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 BACE1P56817 501 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 G3BP1Q13283 466 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 MTMR2Q13614 643 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 TRIB2Q92519 343 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 P2RX7Q99572 595 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 WDR18Q9BV38 432 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 DHX36Q9H2U1 1008 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 AATFQ9NY61 560 aaKnown RBP eCLIP12.58□□□□□ -0.46e-12■■□□□ 12.2
UBE2D3-206ENST00000357194 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 ZMYND8Q9ULU4 1186 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
UBE2D3-206ENST00000357194 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 DLL1O00548 723 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 PEX10O60683 326 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 BAG3O95817 575 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 ASNSP08243 561 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 SYN1P17600 705 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 JAG1P78504 1218 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 NAA16Q6N069 864 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 TGFBRAP1Q8WUH2 860 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 OGDHLQ9ULD0 1010 aa12.57□□□□□ -0.4
UBE2D3-206ENST00000357194 PNMA6EA0A0J9YXQ4 647 aa12.56□□□□□ -0.4
UBE2D3-206ENST00000357194 C19orf81C9J6K1 198 aa12.56□□□□□ -0.4
UBE2D3-206ENST00000357194 GNAI2P04899 355 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms