RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MAPK8IP1Q9UQF2 711 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 BCRP11274 1271 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 CCDC38Q502W7 563 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 RSAD2Q8WXG1 361 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 NUP58Q9BVL2 599 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 GSTA1P08263 222 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 GSTA2P09210 222 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 MYL5Q02045 173 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 SCYL1Q96KG9 808 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 GLT8D2Q9H1C3 349 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 IRS4O14654 1257 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 SF3A3Q12874 501 aaKnown RBP eCLIP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 SLC9C1Q4G0N8 1177 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 DHX32Q7L7V1 743 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 CROCCP2Q86T23 111 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 GTF3C6Q969F1 213 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 SPC25Q9HBM1 224 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 POLR2DO15514 142 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 BEND3Q5T5X7 828 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 ANKRD20A3Q5VUR7 823 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 CREB3L3Q68CJ9 461 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 EVCP57679 992 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 ZYXQ15942 572 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 MGARPQ8TDB4 240 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 RASSF2P50749 326 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 A6NNZ2 444 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 TOM1O60784 492 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 TUBB8Q3ZCM7 444 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 SKA2Q8WVK7 121 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 ABL1P00519 1130 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 INPP5BP32019 993 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 SDCCAG3Q96C92 435 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PDE1AP54750 535 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 BAG5Q9UL15 447 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 UBAP1LF5GYI3 381 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 ZBED4O75132 1171 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 FLOT1O75955 427 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PPARDQ03181 441 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 POTEDQ86YR6 584 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PDCD7Q8N8D1 485 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PFDN6O15212 129 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 CCDC184Q52MB2 194 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 CSGALNACT2Q8N6G5 542 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 MEIS3Q99687 375 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PDZD8Q8NEN9 1154 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 MRPL44Q9H9J2 332 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PRIM1P49642 420 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 COG7P83436 770 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 MYCT1Q8N699 235 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 ITKQ08881 620 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 DDB1Q16531 1140 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PNMA8AQ86V59 439 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 P3H4Q92791 437 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 CHMP6Q96FZ7 201 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 RNF113AO15541 343 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 SYCE1Q8N0S2 351 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 EFCC1Q9HA90 598 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 CALCRLQ16602 461 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 MAP3K21Q5TCX8 1036 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 KRT12Q99456 494 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 MSH6P52701 1360 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 RASSF4Q9H2L5 321 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 CTTNBP2NLQ9P2B4 639 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 ZKSCAN5Q9Y2L8 839 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 BAG2O95816 211 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 PA2G4Q9UQ80 394 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 A0A1B0GUL7 405 aa6.41□□□□□ -1.38
SRGAP1-201ENST00000355086 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 STK38LQ9Y2H1 464 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 CXorf38Q8TB03 319 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 SECISBP2LQ93073 1101 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 TTF2Q9UNY4 1162 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 CD19P15391 556 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 HERC4Q5GLZ8 1057 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 XAB2Q9HCS7 855 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 NR1I2O75469 434 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 ATL3Q6DD88 541 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 RUFY3Q7L099 469 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 TEKT1Q969V4 418 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 A0A1B0GVL5 298 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 UFL1O94874 794 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 MIER3Q7Z3K6 550 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 PALM2Q8IXS6 379 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 KSR2Q6VAB6 950 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 SND1Q7KZF4 910 aaKnown RBP eCLIP6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 CEP104O60308 925 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 OPHN1O60890 802 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 EXOC3O60645 756 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 IRX4P78413 519 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 ARHGAP4P98171 946 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 PAK1Q13153 545 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 CFAP221Q4G0U5 840 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 MAIP1Q8WWC4 291 aa6.4□□□□□ -1.38
SRGAP1-201ENST00000355086 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.39
SRGAP1-201ENST00000355086 YWHAEP62258 255 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms