RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SART3Q15020 963 aaKnown RBP21.28■■□□□ 1
SCARF1-202ENST00000348987 RAB21Q9UL25 225 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 A0A0U1RQJ8 604 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 TFRCP02786 760 aaKnown RBP21.28■■□□□ 1
SCARF1-202ENST00000348987 OLFM4Q6UX06 510 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 ATRIPQ8WXE1 791 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 PPM1EQ8WY54 764 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 CARD10Q9BWT7 1032 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 BTG4Q9NY30 223 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 MKRN1Q9UHC7 482 aaKnown RBP21.28■■□□□ 1
SCARF1-202ENST00000348987 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 HPS5Q9UPZ3 1129 aa21.28■■□□□ 1
SCARF1-202ENST00000348987 PRC1O43663 620 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 RHOXF2BP0C7M4 288 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 ANTXR2P58335 489 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 CNNM3Q8NE01 707 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 RHOXF2Q9BQY4 288 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 ERLIN1O75477 346 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 GPTP24298 496 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 CDC27P30260 824 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 PDE4BQ07343 736 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 NKX1-1Q15270 411 aaPredicted RBP21.27■■□□□ 1
SCARF1-202ENST00000348987 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
SCARF1-202ENST00000348987 KLF18A0A0U1RQI7 1052 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 ATP2B1P20020 1258 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 CASP8Q14790 479 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 SKIDA1Q1XH10 827 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 HSP90B2PQ58FF3 399 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 SPECC1LQ69YQ0 1117 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 MSANTD4Q8NCY6 345 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 NCAPGQ9BPX3 1015 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 IMMTQ16891 758 aaKnown RBP21.26■□□□□ 0.99
SCARF1-202ENST00000348987 FOXP4Q8IVH2 680 aaPredicted RBP21.26■□□□□ 0.99
SCARF1-202ENST00000348987 CDC23Q9UJX2 597 aa21.26■□□□□ 0.99
SCARF1-202ENST00000348987 SOWAHDA6NJG2 315 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 GOLGA8BA8MQT2 603 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 VSNL1P62760 191 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 MB21D2Q8IYB1 491 aaPredicted RBP21.25■□□□□ 0.99
SCARF1-202ENST00000348987 CEP112Q8N8E3 955 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 PIGBQ92521 554 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 TMOD3Q9NYL9 352 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 E2F4Q16254 413 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 BRAPQ7Z569 592 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 MYCBPQ99417 103 aaPredicted RBP21.25■□□□□ 0.99
SCARF1-202ENST00000348987 GPAA1O43292 621 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 CCDC175P0C221 793 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 MCAMP43121 646 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 HLFQ16534 295 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 SHC4Q6S5L8 630 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.25■□□□□ 0.99
SCARF1-202ENST00000348987 DEF6Q9H4E7 631 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 FAM204AQ9H8W3 233 aa21.25■□□□□ 0.99
SCARF1-202ENST00000348987 POTEB2H3BUK9 544 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 BMP6P22004 513 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 IFIT5Q13325 482 aaKnown RBP21.24■□□□□ 0.99
SCARF1-202ENST00000348987 GPATCH11Q8N954 259 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 A0A0G2JS52 829 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 SLC39A14Q15043 492 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 METTL16Q86W50 562 aaKnown RBP21.24■□□□□ 0.99
SCARF1-202ENST00000348987 MSL3Q8N5Y2 521 aaKnown RBP21.24■□□□□ 0.99
SCARF1-202ENST00000348987 FAM71BQ8TC56 605 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 APPBP2Q92624 585 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 AIFM3Q96NN9 605 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 NBPF3Q9H094 633 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 GREM2Q9H772 168 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 PCDHA5Q9Y5H7 936 aa21.24■□□□□ 0.99
SCARF1-202ENST00000348987 PARP4Q9UKK3 1724 aaKnown RBP21.24■□□□□ 0.99
SCARF1-202ENST00000348987 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
SCARF1-202ENST00000348987 CHRM1P11229 460 aaPredicted RBP21.23■□□□□ 0.99
SCARF1-202ENST00000348987 RXRAP19793 462 aa21.23■□□□□ 0.99
SCARF1-202ENST00000348987 HPSEQ9Y251 543 aa21.23■□□□□ 0.99
SCARF1-202ENST00000348987 LRRIQ3A6PVS8 624 aaPredicted RBP21.23■□□□□ 0.99
SCARF1-202ENST00000348987 FBXL16Q8N461 479 aa21.23■□□□□ 0.99
SCARF1-202ENST00000348987 CLIC6Q96NY7 704 aa21.23■□□□□ 0.99
SCARF1-202ENST00000348987 CSF1RP07333 972 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 KIF23Q02241 960 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-202ENST00000348987 KIF4BQ2VIQ3 1234 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 LONRF3Q496Y0 759 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 ZNF569Q5MCW4 686 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 TNS2Q63HR2 1409 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.22■□□□□ 0.99
SCARF1-202ENST00000348987 FOXN1O15353 648 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 MYO1BO43795 1136 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 PCCAP05165 728 aaPredicted RBP21.22■□□□□ 0.99
SCARF1-202ENST00000348987 METTL24Q5JXM2 366 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 NFE2L3Q9Y4A8 694 aa21.22■□□□□ 0.99
SCARF1-202ENST00000348987 KIF5CO60282 957 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 LDHAL6AQ6ZMR3 332 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
SCARF1-202ENST00000348987 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 RIPOR2Q9Y4F9 1068 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 ZNF213O14771 459 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 ITGA6P23229 1130 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 RAD9BQ6WBX8 426 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 TICAM2Q86XR7 235 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 ADGRG1Q9Y653 693 aa21.21■□□□□ 0.99
SCARF1-202ENST00000348987 ZFYP08048 801 aaPredicted RBP21.2■□□□□ 0.98
SCARF1-202ENST00000348987 FMR1Q06787 632 aaKnown RBP eCLIP21.2■□□□□ 0.98
SCARF1-202ENST00000348987 TRMT44Q8IYL2 757 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms