RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 HNRNPH1P31943 449 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 ATG9AQ7Z3C6 839 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 CNPY4Q8N129 248 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 IRX2Q9BZI1 471 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-202ENST00000348749 MAST3O60307 1309 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 ATXN2Q99700 1313 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 PPP6R2O75170 966 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 MCM3P25205 808 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 FOXO4P98177 505 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 IMMTQ16891 758 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 LMBR1LQ6UX01 489 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 SUFUQ9UMX1 484 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 ALS2Q96Q42 1657 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 MAP3K15Q6ZN16 1313 aa11.73□□□□□ -0.53
CHRNA1-202ENST00000348749 TJP1Q07157 1748 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 AKR1B15C9JRZ8 316 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 IFIT1P09914 478 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 MTF1Q14872 753 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 PTPN21Q16825 1174 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 ZNF569Q5MCW4 686 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 RASGRP2Q7LDG7 609 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 STAG1Q8WVM7 1258 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 LZTFL1Q9NQ48 299 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 HPCAL4Q9UM19 191 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 GLI3P10071 1580 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 EYA2O00167 538 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 EBAG9O00559 213 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 POLR3DP05423 398 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 FECHP22830 423 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 MNAT1P51948 309 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 TRDNQ13061 729 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 PNOCQ13519 176 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 ENOX1Q8TC92 643 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 NAPGQ99747 312 aaPredicted RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 TTF2Q9UNY4 1162 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 FAM169AQ9Y6X4 670 aa11.72□□□□□ -0.53
CHRNA1-202ENST00000348749 C4AP0C0L4 1744 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 C4BP0C0L5 1744 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 MYH7P12883 1935 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 CDKL5O76039 1030 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 LIG3P49916 1009 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 PDE4BQ07343 736 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 NR1I3Q14994 352 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 MB21D2Q8IYB1 491 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 SLC35F6Q8N357 371 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 NCOA7Q8NI08 942 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 SMARCC1Q92922 1105 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 CWC25Q9NXE8 425 aaPredicted RBP11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
CHRNA1-202ENST00000348749 COL18A1P39060 1754 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 C21orf2O43822 256 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 KIF23Q02241 960 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 DDR1Q08345 913 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 RESP18Q5W5W9 173 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 SHC4Q6S5L8 630 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 CCDC148Q8NFR7 591 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 NEUROD6Q96NK8 337 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 CPDO75976 1380 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 A0A1B0GTH6 734 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 CPLX1O14810 134 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 BMP6P22004 513 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 CCT5P48643 541 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 USP14P54578 494 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 AMPD2Q01433 879 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 GBP6Q6ZN66 633 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 COG1Q8WTW3 980 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 NFE2L3Q9Y4A8 694 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 PCDHA5Q9Y5H7 936 aa11.7□□□□□ -0.54
CHRNA1-202ENST00000348749 TARSL2A2RTX5 802 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-202ENST00000348749 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms