RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 RGS3P49796 1198 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 FASTKD5Q7L8L6 764 aaKnown RBP11.95□□□□□ -0.5
MRPL55-204ENST00000348259 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 DIS3LQ8TF46 1054 aaKnown RBP11.95□□□□□ -0.5
MRPL55-204ENST00000348259 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-204ENST00000348259 DEFB118Q96PH6 123 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 DDX4Q9NQI0 724 aaKnown RBP11.95□□□□□ -0.5
MRPL55-204ENST00000348259 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 ZHX2Q9Y6X8 837 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
MRPL55-204ENST00000348259 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-204ENST00000348259 PDS5AQ29RF7 1337 aaKnown RBP11.94□□□□□ -0.5
MRPL55-204ENST00000348259 DDTLA6NHG4 134 aaPredicted RBP11.94□□□□□ -0.5
MRPL55-204ENST00000348259 EVI5O60447 810 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 SLC5A1P13866 664 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 SMC5Q8IY18 1101 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 ZNF384Q8TF68 577 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 PAWRQ96IZ0 340 aaKnown RBP11.94□□□□□ -0.5
MRPL55-204ENST00000348259 USP40Q9NVE5 1235 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
MRPL55-204ENST00000348259 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 GJD2Q9UKL4 321 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 AGTPBP1Q9UPW5 1226 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 PRUNE2Q8WUY3 3088 aa11.94□□□□□ -0.5
MRPL55-204ENST00000348259 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 TNPO2O14787 897 aaKnown RBP11.93□□□□□ -0.5
MRPL55-204ENST00000348259 SEMA3EO15041 775 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 CTNND1O60716 968 aaKnown RBP11.93□□□□□ -0.5
MRPL55-204ENST00000348259 CIAO1O76071 339 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 LDHBP07195 334 aaKnown RBP11.93□□□□□ -0.5
MRPL55-204ENST00000348259 PHKA1P46020 1223 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 FAM110CQ1W6H9 321 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 TREML2Q5T2D2 321 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
MRPL55-204ENST00000348259 ANKLE1Q8NAG6 615 aa11.93□□□□□ -0.5
MRPL55-204ENST00000348259 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.93□□□□□ -0.5
MRPL55-204ENST00000348259 BIN2Q9UBW5 565 aaPredicted RBP11.93□□□□□ -0.5
MRPL55-204ENST00000348259 MAST2Q6P0Q8 1798 aa11.92□□□□□ -0.5
MRPL55-204ENST00000348259 TBC1D12O60347 775 aa11.92□□□□□ -0.5
MRPL55-204ENST00000348259 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
MRPL55-204ENST00000348259 RHBDL3P58872 404 aa11.92□□□□□ -0.5
MRPL55-204ENST00000348259 MAP3K21Q5TCX8 1036 aa11.92□□□□□ -0.5
MRPL55-204ENST00000348259 CCDC84Q86UT8 332 aaPredicted RBP11.92□□□□□ -0.5
MRPL55-204ENST00000348259 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
MRPL55-204ENST00000348259 GNAI3P08754 354 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 TRIM32Q13049 653 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 ATP2B3Q16720 1220 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 GADL1Q6ZQY3 521 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 NECAB2Q7Z6G3 386 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
MRPL55-204ENST00000348259 PICK1Q9NRD5 415 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 OGDHLQ9ULD0 1010 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 DENND2AQ9ULE3 1009 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 CDH23Q9H251 3354 aa11.91□□□□□ -0.5
MRPL55-204ENST00000348259 PFASO15067 1338 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 HMGCRP04035 888 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 ADORA1P30542 326 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
MRPL55-204ENST00000348259 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 ANKRD13CQ8N6S4 541 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 MORF4L1Q9UBU8 362 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 STXBP5LQ9Y2K9 1186 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
MRPL55-204ENST00000348259 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 TRIM75PA6NK02 468 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 COL6A1P12109 1028 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 RASGRF1Q13972 1273 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 Q7L0L9 218 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 SIRT2Q8IXJ6 389 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 COA7Q96BR5 231 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 MTMR10Q9NXD2 777 aa11.89□□□□□ -0.51
MRPL55-204ENST00000348259 MROH7-TTC4A0A0A0MT08 1334 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 MAGEA10P43363 369 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 GCLCP48506 637 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 C7orf61Q8IZ16 206 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 SMCR8Q8TEV9 937 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 TRIB2Q92519 343 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 USP6NLQ92738 828 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 MEIS3Q99687 375 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 NBPF3Q9H094 633 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 OSBPL5Q9H0X9 879 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 GNL3LQ9NVN8 582 aaKnown RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 MYO5AQ9Y4I1 1855 aaKnown RBP11.88□□□□□ -0.51
MRPL55-204ENST00000348259 MUC3AQ02505 3323 aa11.88□□□□□ -0.51
MRPL55-204ENST00000348259 GNAI2P04899 355 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-204ENST00000348259 BTDP43251 543 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 NUCB1Q02818 461 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
MRPL55-204ENST00000348259 TDHQ8IZJ6 230 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms