RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 A0A0D9SFI3 127 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.94e-7■■■■□ 20.7
PRDM2-203ENST00000343137 NF2P35240 595 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 IFT20Q8IY31 132 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 SPATA5Q8NB90 893 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 CDC42BPBQ9Y5S2 1711 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
PRDM2-203ENST00000343137 PFKFB1P16118 471 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 ATP5DP30049 168 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 HAUS3Q68CZ6 603 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 CSGALNACT2Q8N6G5 542 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 PAF1Q8N7H5 531 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
PRDM2-203ENST00000343137 FAM89AQ96GI7 184 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 NOX5Q96PH1 765 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 SPHKAPQ2M3C7 1700 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 NR1I2O75469 434 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 UBE4AQ14139 1066 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 PIK3AP1Q6ZUJ8 805 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 POTEDQ86YR6 584 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 LRRC8AQ8IWT6 810 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 MICALL1Q8N3F8 863 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 TMEM87AQ8NBN3 555 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 EAF2Q96CJ1 260 aaPredicted RBP9.44□□□□□ -0.9
PRDM2-203ENST00000343137 NGLY1Q96IV0 654 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 VPS16Q9H269 839 aa9.44□□□□□ -0.9
PRDM2-203ENST00000343137 AKNAD1Q5T1N1 836 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 BICD1Q96G01 975 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 RTEL1Q9NZ71 1219 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 HDAC9Q9UKV0 1011 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 YEATS2Q9ULM3 1422 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 EFCAB8A8MWE9 144 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 CIAO1O76071 339 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 C8orf74Q6P047 294 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 CCDC84Q86UT8 332 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 C17orf53Q8N3J3 647 aaPredicted RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 ZNF532Q9HCE3 1301 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 PCP11498 1178 aaKnown RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 ZAP70P43403 619 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 PKP1Q13835 747 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 SLC4A8Q2Y0W8 1093 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 LRRC45Q96CN5 670 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 USP28Q96RU2 1077 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 UGGT1Q9NYU2 1555 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 CLTCL1P53675 1640 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 HIBADHP31937 336 aaKnown RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 TCIRG1Q13488 830 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 NONOQ15233 471 aaKnown RBP eCLIP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 SEL1L2Q5TEA6 688 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 KRBA2Q6ZNG9 492 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 NOSTRINQ8IVI9 506 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
PRDM2-203ENST00000343137 SREK1Q8WXA9 508 aaKnown RBP9.43□□□□□ -0.9
PRDM2-203ENST00000343137 MED23Q9ULK4 1368 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 TRAF5O00463 557 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 MTX1Q13505 466 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 ASIC2Q16515 512 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 LETM2Q2VYF4 491 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 SLC9C1Q4G0N8 1177 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 NELFBQ8WX92 580 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 USP6P35125 1406 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 MED14O60244 1454 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 PPP6R2O75170 966 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
PRDM2-203ENST00000343137 KRT9P35527 623 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 IFT81Q8WYA0 676 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 ZNF496Q96IT1 587 aaPredicted RBP9.42□□□□□ -0.9
PRDM2-203ENST00000343137 HOMER2Q9NSB8 354 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 HSPD1P10809 573 aaKnown RBP9.42□□□□□ -0.9
PRDM2-203ENST00000343137 OTUD7BQ6GQQ9 843 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
PRDM2-203ENST00000343137 SAMD15Q9P1V8 674 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 MADDQ8WXG6 1647 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 TAF5LO75529 589 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 GNA14O95837 355 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 GALNT17Q6IS24 598 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 CPLX4Q7Z7G2 160 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 EYA3Q99504 573 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 IMPG2Q9BZV3 1241 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 FRMD4BQ9Y2L6 1034 aa9.42□□□□□ -0.9
PRDM2-203ENST00000343137 RTCBQ9Y3I0 505 aaKnown RBP9.42□□□□□ -0.9
PRDM2-203ENST00000343137 IKBKBO14920 756 aa9.41□□□□□ -0.9
PRDM2-203ENST00000343137 CETN3O15182 167 aa9.41□□□□□ -0.9
PRDM2-203ENST00000343137 ETF1P62495 437 aaKnown RBP9.41□□□□□ -0.9
PRDM2-203ENST00000343137 PPFIA1Q13136 1202 aa9.41□□□□□ -0.9
PRDM2-203ENST00000343137 CALCOCO2Q13137 446 aa9.41□□□□□ -0.9
PRDM2-203ENST00000343137 RUFY4Q6ZNE9 571 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms