RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 NAIF1Q69YI7 327 aaPredicted RBP20.94■□□□□ 0.94
SMPD1-201ENST00000342245 TRAPPC11Q7Z392 1133 aa20.94■□□□□ 0.94
SMPD1-201ENST00000342245 TRIML1Q8N9V2 468 aa20.94■□□□□ 0.94
SMPD1-201ENST00000342245 BOLA2Q9H3K6 86 aa20.94■□□□□ 0.94
SMPD1-201ENST00000342245 LAMA4Q16363 1823 aa20.94■□□□□ 0.94
SMPD1-201ENST00000342245 GOLGA6L7A0A1B0GV03 622 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 CCDC40Q4G0X9 1142 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 NBPF10Q6P3W6 841 aaKnown RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 CCNI2Q6ZMN8 369 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 PHAXQ9H814 394 aaKnown RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 FAM184BQ9ULE4 1060 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 MROH7-TTC4A0A0A0MT08 1334 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 IRF6O14896 467 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 ICA1Q05084 483 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 RIN2Q8WYP3 895 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 EAF2Q96CJ1 260 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 CTAGE1Q96RT6 745 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 ACTR5Q9H9F9 607 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-201ENST00000342245 WWC3Q9ULE0 1092 aa20.93■□□□□ 0.94
SMPD1-201ENST00000342245 OVOS2A0A0G2JMS6 1433 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 OVOS2A0A0J9YW53 1432 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 OVOS2Q6IE36 1432 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 SRRM3A6NNA2 597 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-201ENST00000342245 MFAP3LO75121 409 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 PTPN21Q16825 1174 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 RESP18Q5W5W9 173 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 SEC62Q99442 399 aaKnown RBP20.92■□□□□ 0.94
SMPD1-201ENST00000342245 MAP3K19Q56UN5 1328 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 POLR3DP05423 398 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-201ENST00000342245 HOXB7P09629 217 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 FDPSP14324 419 aaKnown RBP20.92■□□□□ 0.94
SMPD1-201ENST00000342245 SLC8A3P57103 927 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 SNCBQ16143 134 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 MCMDC2Q4G0Z9 681 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 ALS2CLQ60I27 953 aa20.92■□□□□ 0.94
SMPD1-201ENST00000342245 CDC5LQ99459 802 aaKnown RBP20.92■□□□□ 0.94
SMPD1-201ENST00000342245 SLC8A1P32418 973 aa20.91■□□□□ 0.94
SMPD1-201ENST00000342245 LRRC2Q9BYS8 371 aa20.91■□□□□ 0.94
SMPD1-201ENST00000342245 PCDHA5Q9Y5H7 936 aa20.91■□□□□ 0.94
SMPD1-201ENST00000342245 ANKARQ7Z5J8 1434 aa20.91■□□□□ 0.94
SMPD1-201ENST00000342245 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 PSMD14O00487 310 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 ERCC5P28715 1186 aaPredicted RBP20.9■□□□□ 0.94
SMPD1-201ENST00000342245 RBL2Q08999 1139 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 METTL16Q86W50 562 aaKnown RBP20.9■□□□□ 0.94
SMPD1-201ENST00000342245 TICAM2Q86XR7 235 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 ATP6V0A4Q9HBG4 840 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 SAMM50Q9Y512 469 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 ITIH6Q6UXX5 1313 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 ROBO2Q9HCK4 1378 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 IFFO1Q0D2I5 559 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 NCAPH2Q6IBW4 605 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 PEAK1Q9H792 1746 aa20.9■□□□□ 0.94
SMPD1-201ENST00000342245 PDE4BQ07343 736 aa20.89■□□□□ 0.94
SMPD1-201ENST00000342245 FILIP1LQ4L180 1135 aa20.89■□□□□ 0.94
SMPD1-201ENST00000342245 NT5DC1Q5TFE4 455 aa20.89■□□□□ 0.94
SMPD1-201ENST00000342245 TEX13AQ9BXU3 409 aaPredicted RBP20.89■□□□□ 0.94
SMPD1-201ENST00000342245 NALCNQ8IZF0 1738 aa20.89■□□□□ 0.94
SMPD1-201ENST00000342245 CLNS1AP54105 237 aaKnown RBP20.89■□□□□ 0.93
SMPD1-201ENST00000342245 TBC1D8BQ0IIM8 1120 aa20.89■□□□□ 0.93
SMPD1-201ENST00000342245 TAX1BP1Q86VP1 789 aa20.89■□□□□ 0.93
SMPD1-201ENST00000342245 ARMC2Q8NEN0 867 aa20.89■□□□□ 0.93
SMPD1-201ENST00000342245 AENQ8WTP8 325 aaKnown RBP20.89■□□□□ 0.93
SMPD1-201ENST00000342245 CCDC8Q9H0W5 538 aaPredicted RBP20.89■□□□□ 0.93
SMPD1-201ENST00000342245 NCOA5Q9HCD5 579 aaKnown RBP20.89■□□□□ 0.93
SMPD1-201ENST00000342245 BATF3Q9NR55 127 aa20.89■□□□□ 0.93
SMPD1-201ENST00000342245 TNRQ92752 1358 aa20.89■□□□□ 0.93
SMPD1-201ENST00000342245 SASH1O94885 1247 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 NAP1L1P55209 391 aaKnown RBP20.88■□□□□ 0.93
SMPD1-201ENST00000342245 INHBEP58166 350 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 NBPF9Q3BBW0 867 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 RCSD1Q6JBY9 416 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 CYP26C1Q6V0L0 522 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 SH3GL3Q99963 347 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 SLC24A3Q9HC58 644 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 SAR1BQ9Y6B6 198 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 TECPR2O15040 1411 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 COL15A1P39059 1388 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 SEMA3EO15041 775 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 PBX1P40424 430 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 ADCY2Q08462 1091 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 HSP90AB2PQ58FF8 381 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 SHC4Q6S5L8 630 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 STOX1Q6ZVD7 989 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 EHBP1Q8NDI1 1231 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 RUFY1Q96T51 708 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 EPN3Q9H201 632 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 FMN2Q9NZ56 1722 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 MRC1P22897 1456 aa20.88■□□□□ 0.93
SMPD1-201ENST00000342245 C9orf78Q9NZ63 289 aaPredicted RBP20.87■□□□□ 0.93
SMPD1-201ENST00000342245 MAN1B1Q9UKM7 699 aa20.87■□□□□ 0.93
SMPD1-201ENST00000342245 CLSTN1O94985 981 aa20.87■□□□□ 0.93
SMPD1-201ENST00000342245 ATP5JP18859 108 aa20.87■□□□□ 0.93
SMPD1-201ENST00000342245 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
SMPD1-201ENST00000342245 KIF23Q02241 960 aaPredicted RBP20.87■□□□□ 0.93
SMPD1-201ENST00000342245 TRIM14Q14142 442 aa20.87■□□□□ 0.93
SMPD1-201ENST00000342245 EMC10Q5UCC4 262 aa20.87■□□□□ 0.93
SMPD1-201ENST00000342245 PAPD7Q5XG87 772 aaKnown RBP20.87■□□□□ 0.93
SMPD1-201ENST00000342245 TLDC1Q6P9B6 456 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms