RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TACC3Q9Y6A5 838 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 GOLGA6L6A8MZA4 724 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 CAVIN2O95810 425 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 RXRAP19793 462 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 PRDX5P30044 214 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 CHRNA5P30532 468 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 ZNF75DP51815 510 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 MECOMQ03112 1051 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 PLA2G4DQ86XP0 818 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 DZIP1Q86YF9 867 aaKnown RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 MRPS27Q92552 414 aaKnown RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 NACAP1Q9BZK3 213 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 POLR3EQ9NVU0 708 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 MAST2Q6P0Q8 1798 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 A0A1W2PQ27 194 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 A0A1W2PQ64 194 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 A0A1W2PQD8 194 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 RIMBP2O15034 1052 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 YEATS4O95619 227 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 CDC27P30260 824 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 IQCB1Q15051 598 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 STK38Q15208 465 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 STX1AQ16623 288 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 ADALQ6DHV7 355 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 FMR1NBQ8N0W7 255 aaPredicted RBP17.42■□□□□ 0.38
TPM3-208ENST00000341485 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 TMEM87BQ96K49 555 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 AIFM3Q96NN9 605 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 LY9Q9HBG7 655 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 SPTLC3Q9NUV7 552 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 PYCARDQ9ULZ3 195 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 CCDC88AQ3V6T2 1871 aa17.42■□□□□ 0.38
TPM3-208ENST00000341485 LDHBP07195 334 aaKnown RBP17.41■□□□□ 0.38
TPM3-208ENST00000341485 IL1R1P14778 569 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 TDO2P48775 406 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 CTDSPL2Q05D32 466 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
TPM3-208ENST00000341485 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 PRKAB2O43741 272 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 KCNG4Q8TDN1 519 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 ALG1Q9BT22 464 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 TRIM5Q9C035 493 aa17.41■□□□□ 0.38
TPM3-208ENST00000341485 ZC3H12CQ9C0D7 883 aaKnown RBP17.41■□□□□ 0.38
TPM3-208ENST00000341485 PTGS1P23219 599 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
TPM3-208ENST00000341485 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 KIAA1524Q8TCG1 905 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 A0A087WWV3 80 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 SPTLC2O15270 562 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 ZBTB43O43298 467 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 IGSF3O75054 1194 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 CDKL5O76039 1030 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 NDUFA8P51970 172 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 DYNLL1P63167 89 aaKnown RBP17.4■□□□□ 0.38
TPM3-208ENST00000341485 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
TPM3-208ENST00000341485 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 SGMS1Q86VZ5 419 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 EYA3Q99504 573 aa17.4■□□□□ 0.38
TPM3-208ENST00000341485 FAM217BQ9NTX9 383 aaPredicted RBP17.4■□□□□ 0.38
TPM3-208ENST00000341485 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
TPM3-208ENST00000341485 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 UQCRHLA0A096LP55 91 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 G3V3G9 751 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 UQCRHP07919 91 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 NTRK3Q16288 839 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.39■□□□□ 0.37
TPM3-208ENST00000341485 CCDC144CPQ8IYA2 1237 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 PHKBQ93100 1093 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 RIOK1Q9BRS2 568 aaKnown RBP17.39■□□□□ 0.37
TPM3-208ENST00000341485 MYL10Q9BUA6 226 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 COA1Q9GZY4 146 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 ZSWIM5Q9P217 1185 aa17.39■□□□□ 0.37
TPM3-208ENST00000341485 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 GSTO1P78417 241 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 KRT40Q6A162 431 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 SYNE3Q6ZMZ3 975 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 NFXL1Q6ZNB6 911 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
TPM3-208ENST00000341485 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
TPM3-208ENST00000341485 LIFRP42702 1097 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 AKNAD1Q5T1N1 836 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 CPLX2Q6PUV4 134 aaKnown RBP17.38■□□□□ 0.37
TPM3-208ENST00000341485 SDR42E1Q8WUS8 393 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
TPM3-208ENST00000341485 NRBP1Q9UHY1 535 aa17.38■□□□□ 0.37
TPM3-208ENST00000341485 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
TPM3-208ENST00000341485 IFIT3O14879 490 aaKnown RBP17.37■□□□□ 0.37
TPM3-208ENST00000341485 DNTTIP2Q5QJE6 756 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms