RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
LINC01116-202ENST00000339037 FAM196BA6NMK8 535 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 ADCY3O60266 1144 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 TBC1D12O60347 775 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 FLT3LGP49771 235 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 UBE2Q1Q7Z7E8 422 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 CCDC84Q86UT8 332 aaPredicted RBP19.28■□□□□ 0.68
LINC01116-202ENST00000339037 SPATA5Q8NB90 893 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 U2AF1L4Q8WU68 220 aaKnown RBP19.28■□□□□ 0.68
LINC01116-202ENST00000339037 HTATIP2Q9BUP3 242 aa19.28■□□□□ 0.68
LINC01116-202ENST00000339037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.28■□□□□ 0.68
LINC01116-202ENST00000339037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.28■□□□□ 0.68
LINC01116-202ENST00000339037 MAP4K4O95819 1239 aaPredicted RBP19.27■□□□□ 0.68
LINC01116-202ENST00000339037 LDHCP07864 332 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 ELNP15502 786 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 CHRDL2Q6WN34 429 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 TBC1D9Q6ZT07 1266 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 NSUN4Q96CB9 384 aaKnown RBP19.27■□□□□ 0.68
LINC01116-202ENST00000339037 UNC93B1Q9H1C4 597 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 RAI14Q9P0K7 980 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 PNMA3Q9UL41 463 aa19.27■□□□□ 0.68
LINC01116-202ENST00000339037 PTPRFP10586 1907 aa19.27■□□□□ 0.67
LINC01116-202ENST00000339037 FARP2O94887 1054 aaPredicted RBP19.26■□□□□ 0.67
LINC01116-202ENST00000339037 GNAI2P04899 355 aa19.26■□□□□ 0.67
LINC01116-202ENST00000339037 IRF5Q13568 498 aa19.26■□□□□ 0.67
LINC01116-202ENST00000339037 TREML2Q5T2D2 321 aa19.26■□□□□ 0.67
LINC01116-202ENST00000339037 ANKRD13CQ8N6S4 541 aa19.26■□□□□ 0.67
LINC01116-202ENST00000339037 PXYLP1Q8TE99 480 aa19.26■□□□□ 0.67
LINC01116-202ENST00000339037 OSBPL5Q9H0X9 879 aaPredicted RBP19.26■□□□□ 0.67
LINC01116-202ENST00000339037 COL2A1P02458 1487 aaPredicted RBP19.26■□□□□ 0.67
LINC01116-202ENST00000339037 MGAMO43451 1857 aa19.26■□□□□ 0.67
LINC01116-202ENST00000339037 IPO8O15397 1037 aaKnown RBP19.25■□□□□ 0.67
LINC01116-202ENST00000339037 INHAP05111 366 aa19.25■□□□□ 0.67
LINC01116-202ENST00000339037 TRIM27P14373 513 aa19.25■□□□□ 0.67
LINC01116-202ENST00000339037 ARID4AP29374 1257 aaPredicted RBP19.25■□□□□ 0.67
LINC01116-202ENST00000339037 FAM110CQ1W6H9 321 aa19.25■□□□□ 0.67
LINC01116-202ENST00000339037 PROCA1Q8NCQ7 364 aaPredicted RBP19.25■□□□□ 0.67
LINC01116-202ENST00000339037 PHIPQ8WWQ0 1821 aa19.25■□□□□ 0.67
LINC01116-202ENST00000339037 A0A0C4DFX4 3053 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 SGPL1O95470 568 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 SPP2Q13103 211 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 G3BP1Q13283 466 aaKnown RBP eCLIP19.24■□□□□ 0.67
LINC01116-202ENST00000339037 ZNF280CQ8ND82 737 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 COA7Q96BR5 231 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 LRP2BPQ9P2M1 347 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
LINC01116-202ENST00000339037 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
LINC01116-202ENST00000339037 MCAMP43121 646 aa19.23■□□□□ 0.67
LINC01116-202ENST00000339037 ATF7IPQ6VMQ6 1270 aa19.23■□□□□ 0.67
LINC01116-202ENST00000339037 TEX11Q8IYF3 940 aa19.23■□□□□ 0.67
LINC01116-202ENST00000339037 FRAT1Q92837 279 aaPredicted RBP19.23■□□□□ 0.67
LINC01116-202ENST00000339037 NOL10Q9BSC4 688 aaKnown RBP19.23■□□□□ 0.67
LINC01116-202ENST00000339037 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
LINC01116-202ENST00000339037 HERC5Q9UII4 1024 aaKnown RBP19.23■□□□□ 0.67
LINC01116-202ENST00000339037 NR2E3Q9Y5X4 410 aa19.23■□□□□ 0.67
LINC01116-202ENST00000339037 UQCRFS1P1P0C7P4 283 aa19.22■□□□□ 0.67
LINC01116-202ENST00000339037 CAP2P40123 477 aa19.22■□□□□ 0.67
LINC01116-202ENST00000339037 HMGCS2P54868 508 aa19.22■□□□□ 0.67
LINC01116-202ENST00000339037 PABPC4Q13310 644 aaKnown RBP eCLIP19.22■□□□□ 0.67
LINC01116-202ENST00000339037 DEFB118Q96PH6 123 aa19.22■□□□□ 0.67
LINC01116-202ENST00000339037 RBM27Q9P2N5 1060 aaKnown RBP19.22■□□□□ 0.67
LINC01116-202ENST00000339037 GCLCP48506 637 aaPredicted RBP19.21■□□□□ 0.67
LINC01116-202ENST00000339037 SPDYE1Q8NFV5 336 aaPredicted RBP19.21■□□□□ 0.67
LINC01116-202ENST00000339037 CLUAP1Q96AJ1 413 aa19.21■□□□□ 0.67
LINC01116-202ENST00000339037 PAK6Q9NQU5 681 aaPredicted RBP19.21■□□□□ 0.67
LINC01116-202ENST00000339037 USP17L5A8MUK1 530 aa19.2■□□□□ 0.66
LINC01116-202ENST00000339037 TFRCP02786 760 aaKnown RBP19.2■□□□□ 0.66
LINC01116-202ENST00000339037 CAPN2P17655 700 aa19.2■□□□□ 0.66
LINC01116-202ENST00000339037 SH3RF3Q8TEJ3 882 aaPredicted RBP19.2■□□□□ 0.66
LINC01116-202ENST00000339037 AS3MTQ9HBK9 375 aa19.2■□□□□ 0.66
LINC01116-202ENST00000339037 PI4KBQ9UBF8 816 aa19.2■□□□□ 0.66
LINC01116-202ENST00000339037 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
LINC01116-202ENST00000339037 COL6A3P12111 3177 aa19.2■□□□□ 0.66
LINC01116-202ENST00000339037 LOC285556D6RIA3 1793 aa19.19■□□□□ 0.66
LINC01116-202ENST00000339037 BCAR3O75815 825 aa19.19■□□□□ 0.66
LINC01116-202ENST00000339037 BAG3O95817 575 aa19.19■□□□□ 0.66
LINC01116-202ENST00000339037 RRP1BQ14684 758 aaKnown RBP19.19■□□□□ 0.66
LINC01116-202ENST00000339037 NAA16Q6N069 864 aaPredicted RBP19.19■□□□□ 0.66
LINC01116-202ENST00000339037 ASCC2Q9H1I8 757 aaPredicted RBP19.19■□□□□ 0.66
LINC01116-202ENST00000339037 DHX36Q9H2U1 1008 aaKnown RBP19.19■□□□□ 0.66
LINC01116-202ENST00000339037 AATFQ9NY61 560 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC01116-202ENST00000339037 PLCG2P16885 1265 aa19.18■□□□□ 0.66
LINC01116-202ENST00000339037 TTC39AQ5SRH9 613 aa19.18■□□□□ 0.66
LINC01116-202ENST00000339037 SNRKQ9NRH2 765 aa19.18■□□□□ 0.66
LINC01116-202ENST00000339037 ZBTB7BO15156 539 aaPredicted RBP19.17■□□□□ 0.66
LINC01116-202ENST00000339037 EVI5O60447 810 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 ASNSP08243 561 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
LINC01116-202ENST00000339037 MTMR2Q13614 643 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 TNNI3KQ59H18 835 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 SH3D19Q5HYK7 790 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 CCDC158Q5M9N0 1113 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 CRISPLD2Q9H0B8 497 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.17■□□□□ 0.66
LINC01116-202ENST00000339037 GPR108Q9NPR9 543 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 FPGT-TNNI3KV9GXZ4 949 aa19.17■□□□□ 0.66
LINC01116-202ENST00000339037 HMGCRP04035 888 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 IRX3P78415 501 aaPredicted RBP19.16■□□□□ 0.66
LINC01116-202ENST00000339037 MAPKAPK5Q8IW41 473 aa19.16■□□□□ 0.66
LINC01116-202ENST00000339037 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms