RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 UNC93B1Q9H1C4 597 aa17.48■□□□□ 0.39
COMMD4-202ENST00000338995 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
COMMD4-202ENST00000338995 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
COMMD4-202ENST00000338995 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
COMMD4-202ENST00000338995 CCER2I3L3R5 266 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 IGSF3O75054 1194 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-202ENST00000338995 CAP2P40123 477 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 FAM110CQ1W6H9 321 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 ATF7IPQ6VMQ6 1270 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 CHRDL2Q6WN34 429 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 TBC1D9Q6ZT07 1266 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 FRAT1Q92837 279 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-202ENST00000338995 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
COMMD4-202ENST00000338995 RFX7Q2KHR2 1363 aa17.46■□□□□ 0.39
COMMD4-202ENST00000338995 INHAP05111 366 aa17.46■□□□□ 0.39
COMMD4-202ENST00000338995 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-202ENST00000338995 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-202ENST00000338995 ZSWIM8A7E2V4 1837 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 EVI5O60447 810 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 ELNP15502 786 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-202ENST00000338995 UBE2Q1Q7Z7E8 422 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
COMMD4-202ENST00000338995 SLURP2P0DP57 97 aa17.44■□□□□ 0.38
COMMD4-202ENST00000338995 TRIM27P14373 513 aa17.44■□□□□ 0.38
COMMD4-202ENST00000338995 TREML2Q5T2D2 321 aa17.44■□□□□ 0.38
COMMD4-202ENST00000338995 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
COMMD4-202ENST00000338995 GINM1Q9NU53 330 aa17.44■□□□□ 0.38
COMMD4-202ENST00000338995 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
COMMD4-202ENST00000338995 CEP290O15078 2479 aa17.43■□□□□ 0.38
COMMD4-202ENST00000338995 FAM196BA6NMK8 535 aa17.43■□□□□ 0.38
COMMD4-202ENST00000338995 ASNSP08243 561 aa17.43■□□□□ 0.38
COMMD4-202ENST00000338995 HMGCS2P54868 508 aa17.43■□□□□ 0.38
COMMD4-202ENST00000338995 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-202ENST00000338995 CCDC84Q86UT8 332 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-202ENST00000338995 CRACR2BQ8N4Y2 399 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-202ENST00000338995 ZNF384Q8TF68 577 aa17.43■□□□□ 0.38
COMMD4-202ENST00000338995 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 C19orf81C9J6K1 198 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 MCAMP43121 646 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 PPP4CP60510 307 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 SH3D19Q5HYK7 790 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 PI16Q6UXB8 463 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 NECAB2Q7Z6G3 386 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 WDR18Q9BV38 432 aa17.42■□□□□ 0.38
COMMD4-202ENST00000338995 ASCC2Q9H1I8 757 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 AATFQ9NY61 560 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 RBM27Q9P2N5 1060 aaKnown RBP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 COL2A1P02458 1487 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-202ENST00000338995 ZBTB7BO15156 539 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-202ENST00000338995 BACE1P56817 501 aa17.41■□□□□ 0.38
COMMD4-202ENST00000338995 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
COMMD4-202ENST00000338995 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
COMMD4-202ENST00000338995 TGFBRAP1Q8WUH2 860 aa17.41■□□□□ 0.38
COMMD4-202ENST00000338995 HMX1Q9NP08 348 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-202ENST00000338995 PAK6Q9NQU5 681 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-202ENST00000338995 MGAMO43451 1857 aa17.41■□□□□ 0.38
COMMD4-202ENST00000338995 BRCA2P51587 3418 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
COMMD4-202ENST00000338995 BCAR3O75815 825 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 HMGCRP04035 888 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 HLA-DOAP06340 250 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.38
COMMD4-202ENST00000338995 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.4■□□□□ 0.38
COMMD4-202ENST00000338995 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 RPTORQ8N122 1335 aa17.4■□□□□ 0.38
COMMD4-202ENST00000338995 DOCK1Q14185 1865 aa17.39■□□□□ 0.38
COMMD4-202ENST00000338995 A0A1W2PPC1 479 aa17.39■□□□□ 0.37
COMMD4-202ENST00000338995 USP17L10C9JJH3 530 aa17.39■□□□□ 0.37
COMMD4-202ENST00000338995 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-202ENST00000338995 MAPKAPK5Q8IW41 473 aa17.39■□□□□ 0.37
COMMD4-202ENST00000338995 TRMT44Q8IYL2 757 aaKnown RBP17.39■□□□□ 0.37
COMMD4-202ENST00000338995 GPRC5AQ8NFJ5 357 aa17.39■□□□□ 0.37
COMMD4-202ENST00000338995 GTF3C2Q8WUA4 911 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-202ENST00000338995 PAWRQ96IZ0 340 aaKnown RBP17.39■□□□□ 0.37
COMMD4-202ENST00000338995 ZNF512BQ96KM6 892 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-202ENST00000338995 TRIOBPQ9H2D6 2365 aa17.39■□□□□ 0.37
COMMD4-202ENST00000338995 MTMR2Q13614 643 aa17.38■□□□□ 0.37
COMMD4-202ENST00000338995 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
COMMD4-202ENST00000338995 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
COMMD4-202ENST00000338995 NUDT12Q9BQG2 462 aa17.38■□□□□ 0.37
COMMD4-202ENST00000338995 MORF4L1Q9UBU8 362 aa17.38■□□□□ 0.37
COMMD4-202ENST00000338995 GJD2Q9UKL4 321 aa17.38■□□□□ 0.37
COMMD4-202ENST00000338995 POLA2Q14181 598 aa17.37■□□□□ 0.37
COMMD4-202ENST00000338995 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
COMMD4-202ENST00000338995 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
COMMD4-202ENST00000338995 P2RX7Q99572 595 aaKnown RBP17.37■□□□□ 0.37
COMMD4-202ENST00000338995 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms