RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 ZSCAN10Q96SZ4 725 aaPredicted RBP16.07■□□□□ 0.16
PARVB-201ENST00000338758 IVNS1ABPQ9Y6Y0 642 aa16.07■□□□□ 0.16
PARVB-201ENST00000338758 UQCRHLA0A096LP55 91 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 UQCRHP07919 91 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 CCDC186Q7Z3E2 898 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 GTF3C6Q969F1 213 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 SNAP23O00161 211 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 SEMA3EO15041 775 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 KCNH3Q9ULD8 1083 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 ELP1O95163 1332 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 TMCO5BA8MYB1 307 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 CERKQ8TCT0 537 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 NARFQ9UHQ1 456 aa16.06■□□□□ 0.16
PARVB-201ENST00000338758 ZBED4O75132 1171 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 PLCD1P51178 756 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 SV2BQ7L1I2 683 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 MTERF4Q7Z6M4 381 aaKnown RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 LRRC47Q8N1G4 583 aaKnown RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 CLRN2A0PK11 232 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 KRT25Q7Z3Z0 450 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 DYNLL1P63167 89 aaKnown RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 RBM6P78332 1123 aaKnown RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 CASQ1P31415 396 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 FAM193AP78312 1265 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 ZNF589Q86UQ0 364 aaPredicted RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 TPCN1Q9ULQ1 816 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
PARVB-201ENST00000338758 CSADQ9Y600 493 aa16.05■□□□□ 0.16
PARVB-201ENST00000338758 PPRC1Q5VV67 1664 aaKnown RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 RAD17O75943 681 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 GOLGA8HP0CJ92 632 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 ZNF830Q96NB3 372 aaPredicted RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 CYP21A2P08686 494 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 GRAPQ13588 217 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 GRAPLQ8TC17 118 aaPredicted RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 LEO1Q8WVC0 666 aaPredicted RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 LSG1Q9H089 658 aaKnown RBP16.04■□□□□ 0.16
PARVB-201ENST00000338758 POLA2Q14181 598 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 PTGS1P23219 599 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.04■□□□□ 0.16
PARVB-201ENST00000338758 JCADQ9P266 1359 aa16.04■□□□□ 0.16
PARVB-201ENST00000338758 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
PARVB-201ENST00000338758 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 ARHGEF40Q8TER5 1519 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 ICA1Q05084 483 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 GPR101Q96P66 508 aaPredicted RBP16.03■□□□□ 0.16
PARVB-201ENST00000338758 MAP7D2Q96T17 732 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 BIN2Q9UBW5 565 aaPredicted RBP16.03■□□□□ 0.16
PARVB-201ENST00000338758 SMCO2A6NFE2 343 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 ARID5AQ03989 594 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 BCORL1Q5H9F3 1711 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 BICDL2A1A5D9 508 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
PARVB-201ENST00000338758 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 CRB1P82279 1406 aa16.03■□□□□ 0.16
PARVB-201ENST00000338758 FRMPD2Q68DX3 1309 aaPredicted RBP16.03■□□□□ 0.16
PARVB-201ENST00000338758 PRKAB2O43741 272 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 SKILP12757 684 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 ADD2P35612 726 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 GNG11P61952 73 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.16
PARVB-201ENST00000338758 TAF3Q5VWG9 929 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 ARHGEF1Q92888 912 aaKnown RBP16.02■□□□□ 0.16
PARVB-201ENST00000338758 OSBP2Q969R2 916 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 MAPK8IP1Q9UQF2 711 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 CAMSAP1Q5T5Y3 1602 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 DDX39AO00148 427 aaKnown RBP16.02■□□□□ 0.16
PARVB-201ENST00000338758 DCAF15Q66K64 600 aa16.02■□□□□ 0.16
PARVB-201ENST00000338758 SMCR8Q8TEV9 937 aaPredicted RBP16.02■□□□□ 0.16
PARVB-201ENST00000338758 BSDC1Q9NW68 430 aaPredicted RBP16.02■□□□□ 0.16
PARVB-201ENST00000338758 HAUS3Q68CZ6 603 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms