RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 NBPF11Q86T75 865 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 UBE2Q2Q8WVN8 375 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.41■□□□□ 0.86
LRCH3-201ENST00000334859 SMTNL1A8MU46 457 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 DEXIO95424 95 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 GSDMDP57764 484 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 ZNF710Q8N1W2 664 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 KRI1Q8N9T8 703 aaKnown RBP20.41■□□□□ 0.86
LRCH3-201ENST00000334859 KCNH3Q9ULD8 1083 aa20.41■□□□□ 0.86
LRCH3-201ENST00000334859 TAF1P21675 1872 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 TNKSO95271 1327 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 GTF2E1P29083 439 aaPredicted RBP20.4■□□□□ 0.86
LRCH3-201ENST00000334859 LMOD1P29536 600 aaPredicted RBP20.4■□□□□ 0.86
LRCH3-201ENST00000334859 CCZ1BP86790 482 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 CCZ1P86791 482 aaPredicted RBP20.4■□□□□ 0.86
LRCH3-201ENST00000334859 CAVIN4Q5BKX8 364 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 FANCBQ8NB91 859 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 ESR2Q92731 530 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
LRCH3-201ENST00000334859 CRACR2BQ8N4Y2 399 aaPredicted RBP20.39■□□□□ 0.86
LRCH3-201ENST00000334859 CNNM3Q8NE01 707 aa20.39■□□□□ 0.86
LRCH3-201ENST00000334859 TUBE1Q9UJT0 475 aa20.39■□□□□ 0.86
LRCH3-201ENST00000334859 COL5A3P25940 1745 aaPredicted RBP20.39■□□□□ 0.86
LRCH3-201ENST00000334859 FAM237AA0A1B0GTK4 181 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 USP27XA6NNY8 438 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 KCNQ4P56696 695 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 NCAPHQ15003 741 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 SPECC1Q5M775 1068 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 CLEC4GQ6UXB4 293 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 TMC6Q7Z403 805 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 MTA3Q9BTC8 594 aa20.39■□□□□ 0.85
LRCH3-201ENST00000334859 SMIM22K7EJ46 135 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 UBE4AQ14139 1066 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 LONRF3Q496Y0 759 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 LINC00116Q8NCU8 138 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 ZNF592Q92610 1267 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 IMPACTQ9P2X3 320 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 A0A1B0GUL6 1792 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 TOB1P50616 345 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-201ENST00000334859 NR5A1Q13285 461 aa20.38■□□□□ 0.85
LRCH3-201ENST00000334859 METTL16Q86W50 562 aaKnown RBP20.38■□□□□ 0.85
LRCH3-201ENST00000334859 OSBPL5Q9H0X9 879 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-201ENST00000334859 FOXP1Q9H334 677 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-201ENST00000334859 BSDC1Q9NW68 430 aaPredicted RBP20.38■□□□□ 0.85
LRCH3-201ENST00000334859 IKBKBO14920 756 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 RCAN1P53805 252 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 DYNLL1P63167 89 aaKnown RBP20.37■□□□□ 0.85
LRCH3-201ENST00000334859 RILPL1Q5EBL4 403 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 KRBA2Q6ZNG9 492 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 RIOK1Q9BRS2 568 aaKnown RBP20.37■□□□□ 0.85
LRCH3-201ENST00000334859 CYP2D7A0A087X1C5 515 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 ATP2B1P20020 1258 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
LRCH3-201ENST00000334859 ANAPC4Q9UJX5 808 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 MINPP1Q9UNW1 487 aa20.37■□□□□ 0.85
LRCH3-201ENST00000334859 BAZ2AQ9UIF9 1905 aaKnown RBP20.36■□□□□ 0.85
LRCH3-201ENST00000334859 CACNA1SQ13698 1873 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 ATP1A3P13637 1013 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 AKAP17AQ02040 695 aaKnown RBP20.36■□□□□ 0.85
LRCH3-201ENST00000334859 MYL5Q02045 173 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 CEP135Q66GS9 1140 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 TRMT1Q9NXH9 659 aaKnown RBP20.36■□□□□ 0.85
LRCH3-201ENST00000334859 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 SCN7AQ01118 1682 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 PRDM1O75626 825 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 FANCCQ00597 558 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 SEC23AQ15436 765 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 OLFM4Q6UX06 510 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 SMIM5Q71RC9 77 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 CCDC150Q8NCX0 1101 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 OXER1Q8TDS5 423 aa20.36■□□□□ 0.85
LRCH3-201ENST00000334859 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
LRCH3-201ENST00000334859 MYH6P13533 1939 aa20.35■□□□□ 0.85
LRCH3-201ENST00000334859 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
LRCH3-201ENST00000334859 GRIN1Q05586 938 aa20.35■□□□□ 0.85
LRCH3-201ENST00000334859 ENAHQ8N8S7 591 aaPredicted RBP20.35■□□□□ 0.85
LRCH3-201ENST00000334859 ZSCAN10Q96SZ4 725 aaPredicted RBP20.35■□□□□ 0.85
LRCH3-201ENST00000334859 PAXBP1Q9Y5B6 917 aa20.35■□□□□ 0.85
LRCH3-201ENST00000334859 PCDHB6Q9Y5E3 794 aa20.35■□□□□ 0.85
LRCH3-201ENST00000334859 MYH2Q9UKX2 1941 aa20.35■□□□□ 0.85
LRCH3-201ENST00000334859 SFPQP23246 707 aaKnown RBP eCLIP20.34■□□□□ 0.85
LRCH3-201ENST00000334859 PTPN14Q15678 1187 aa20.34■□□□□ 0.85
LRCH3-201ENST00000334859 CCDC112Q8NEF3 446 aa20.34■□□□□ 0.85
LRCH3-201ENST00000334859 FAM84BQ96KN1 310 aaPredicted RBP20.34■□□□□ 0.85
LRCH3-201ENST00000334859 HOOK1Q9UJC3 728 aaKnown RBP20.34■□□□□ 0.85
LRCH3-201ENST00000334859 FBXO2Q9UK22 296 aaPredicted RBP20.34■□□□□ 0.85
LRCH3-201ENST00000334859 FOXN1O15353 648 aa20.34■□□□□ 0.85
LRCH3-201ENST00000334859 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
LRCH3-201ENST00000334859 IFIT1BQ5T764 474 aaKnown RBP20.34■□□□□ 0.85
LRCH3-201ENST00000334859 PCDHA5Q9Y5H7 936 aa20.34■□□□□ 0.85
LRCH3-201ENST00000334859 CTIFO43310 598 aaKnown RBP20.33■□□□□ 0.85
LRCH3-201ENST00000334859 KLRK1P26718 216 aa20.33■□□□□ 0.85
LRCH3-201ENST00000334859 TBC1D9BQ66K14 1250 aa20.33■□□□□ 0.85
LRCH3-201ENST00000334859 ARMCX5Q6P1M9 558 aa20.33■□□□□ 0.85
LRCH3-201ENST00000334859 CATIPQ7Z7H3 387 aa20.33■□□□□ 0.85
LRCH3-201ENST00000334859 CCAR2Q8N163 923 aaKnown RBP20.33■□□□□ 0.85
LRCH3-201ENST00000334859 BRIP1Q9BX63 1249 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms