RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 EHD4Q9H223 541 aa18■□□□□ 0.47
CMC1-201ENST00000334841 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
CMC1-201ENST00000334841 ZNF213O14771 459 aa17.99■□□□□ 0.47
CMC1-201ENST00000334841 GABPAQ06546 454 aa17.99■□□□□ 0.47
CMC1-201ENST00000334841 NBPF12Q5TAG4 269 aaPredicted RBP17.99■□□□□ 0.47
CMC1-201ENST00000334841 KCNB2Q92953 911 aa17.99■□□□□ 0.47
CMC1-201ENST00000334841 DYNLL2Q96FJ2 89 aa17.99■□□□□ 0.47
CMC1-201ENST00000334841 DNAJC18Q9H819 358 aa17.99■□□□□ 0.47
CMC1-201ENST00000334841 PI4KBQ9UBF8 816 aa17.99■□□□□ 0.47
CMC1-201ENST00000334841 FAM196BA6NMK8 535 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 CDC37L1Q7L3B6 337 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 METTL16Q86W50 562 aaKnown RBP17.98■□□□□ 0.47
CMC1-201ENST00000334841 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 SLC44A5Q8NCS7 719 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 CDCA5Q96FF9 252 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 SERPINB13Q9UIV8 391 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 PAPPA2Q9BXP8 1791 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 NEDD4P46934 1319 aa17.98■□□□□ 0.47
CMC1-201ENST00000334841 POLR2AP24928 1970 aaKnown RBP17.97■□□□□ 0.47
CMC1-201ENST00000334841 TRAF5O00463 557 aa17.97■□□□□ 0.47
CMC1-201ENST00000334841 CHADLQ6NUI6 762 aa17.97■□□□□ 0.47
CMC1-201ENST00000334841 C16orf86Q6ZW13 317 aa17.97■□□□□ 0.47
CMC1-201ENST00000334841 STAG1Q8WVM7 1258 aa17.97■□□□□ 0.47
CMC1-201ENST00000334841 UPF2Q9HAU5 1272 aaKnown RBP17.97■□□□□ 0.47
CMC1-201ENST00000334841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.97■□□□□ 0.47
CMC1-201ENST00000334841 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
CMC1-201ENST00000334841 MCCP23508 829 aa17.96■□□□□ 0.47
CMC1-201ENST00000334841 RNF20Q5VTR2 975 aa17.96■□□□□ 0.47
CMC1-201ENST00000334841 CRACR2BQ8N4Y2 399 aaPredicted RBP17.96■□□□□ 0.47
CMC1-201ENST00000334841 C22orf23Q9BZE7 217 aa17.96■□□□□ 0.47
CMC1-201ENST00000334841 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
CMC1-201ENST00000334841 E7EWF7 191 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 FGRP09769 529 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 SHMT1P34896 483 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 CDK8P49336 464 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 FMR1Q06787 632 aaKnown RBP eCLIP17.95■□□□□ 0.46
CMC1-201ENST00000334841 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 MIGA2Q7L4E1 593 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
CMC1-201ENST00000334841 HERC5Q9UII4 1024 aaKnown RBP17.95■□□□□ 0.46
CMC1-201ENST00000334841 TBC1D12O60347 775 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 PRDM1O75626 825 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 SLC3A2P08195 630 aaKnown RBP17.94■□□□□ 0.46
CMC1-201ENST00000334841 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
CMC1-201ENST00000334841 RBM25P49756 843 aaKnown RBP17.94■□□□□ 0.46
CMC1-201ENST00000334841 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
CMC1-201ENST00000334841 ADCK5Q3MIX3 580 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 TSGA10IPQ3SY00 556 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
CMC1-201ENST00000334841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
CMC1-201ENST00000334841 SWAP70Q9UH65 585 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 FZD1Q9UP38 647 aa17.94■□□□□ 0.46
CMC1-201ENST00000334841 OTOFQ9HC10 1997 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 ORC4O43929 436 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 ITGBL1O95965 494 aaPredicted RBP17.93■□□□□ 0.46
CMC1-201ENST00000334841 RASA1P20936 1047 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 ANAPC15P60006 121 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 PDE4BQ07343 736 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 SUPT20HL1Q3ZLR7 823 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 HOOK2Q96ED9 719 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 IL17RAQ96F46 866 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 RNF41Q9H4P4 317 aaPredicted RBP17.93■□□□□ 0.46
CMC1-201ENST00000334841 TAOK2Q9UL54 1235 aa17.93■□□□□ 0.46
CMC1-201ENST00000334841 MYH8P13535 1937 aa17.92■□□□□ 0.46
CMC1-201ENST00000334841 PCP11498 1178 aaKnown RBP17.92■□□□□ 0.46
CMC1-201ENST00000334841 RRP1BQ14684 758 aaKnown RBP17.92■□□□□ 0.46
CMC1-201ENST00000334841 DCAF15Q66K64 600 aa17.92■□□□□ 0.46
CMC1-201ENST00000334841 TATDN1Q6P1N9 297 aa17.92■□□□□ 0.46
CMC1-201ENST00000334841 GREB1LQ9C091 1923 aaPredicted RBP17.92■□□□□ 0.46
CMC1-201ENST00000334841 B4E1Z4 1266 aa17.91■□□□□ 0.46
CMC1-201ENST00000334841 KRT32Q14532 448 aa17.91■□□□□ 0.46
CMC1-201ENST00000334841 SHROOM1Q2M3G4 852 aaPredicted RBP17.91■□□□□ 0.46
CMC1-201ENST00000334841 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
CMC1-201ENST00000334841 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
CMC1-201ENST00000334841 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
CMC1-201ENST00000334841 KIF2CQ99661 725 aa17.91■□□□□ 0.46
CMC1-201ENST00000334841 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
CMC1-201ENST00000334841 PHF20L1A8MW92 1017 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 TOMM70O94826 608 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 NF2P35240 595 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 PRKG1Q13976 671 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
CMC1-201ENST00000334841 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
CMC1-201ENST00000334841 ZNF341Q9BYN7 854 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 CNNM2Q9H8M5 875 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 ZNF408Q9H9D4 720 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 MKNK2Q9HBH9 465 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 ZNF287Q9HBT7 754 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 PASKQ96RG2 1323 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 DOCK1Q14185 1865 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 PLIN4Q96Q06 1357 aa17.9■□□□□ 0.46
CMC1-201ENST00000334841 ATAD5Q96QE3 1844 aa17.89■□□□□ 0.45
CMC1-201ENST00000334841 KDM4AO75164 1064 aa17.89■□□□□ 0.45
CMC1-201ENST00000334841 GDF11O95390 407 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms