RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 AFAP1L1Q8TED9 768 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
CDC42BPA-201ENST00000334218 STAT2P52630 851 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 POLGP54098 1239 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 UBXN1Q04323 297 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 PPIDQ08752 370 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 CUL4BQ13620 913 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 RCN1Q15293 331 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 STK32CQ86UX6 486 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SYCP3Q8IZU3 236 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZNF396Q96N95 335 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 RCAN3Q9UKA8 241 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 PNMA1Q8ND90 353 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 EFHD1Q9BUP0 239 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 MAP10Q9P2G4 905 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 EXOC5O00471 708 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ADCY3O60266 1144 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 MCF2P10911 925 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 FYB2Q5VWT5 728 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 C16orf87Q6PH81 154 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZYG11AQ6WRX3 759 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 RUFY4Q6ZNE9 571 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SDF4Q9BRK5 362 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 CPEP16870 476 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 PRR23BQ6ZRT6 265 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP8B4Q8TF62 1192 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 FERMT1Q9BQL6 677 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 TFIP11Q9UBB9 837 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 EEF1GP26641 437 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 MAGEA9P43362 315 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 RRP1P56182 461 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 POU5F1Q01860 360 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SAFBQ15424 915 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 DIXDC1Q155Q3 683 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SPOCK2Q92563 424 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 MCUR1Q96AQ8 359 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 CYTH2Q99418 400 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 TBC1D23Q9NUY8 699 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 PNMA2Q9UL42 364 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SCAF8Q9UPN6 1271 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 CAPN7Q9Y6W3 813 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 RAD50Q92878 1312 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SCAPERQ9BY12 1400 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 WDR97A6NE52 1622 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZEB2O60315 1214 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 IFIT2P09913 472 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ANAPC5Q9UJX4 755 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 KIF15Q9NS87 1388 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 STXBP4Q6ZWJ1 553 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 STAMBPL1Q96FJ0 436 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 TANGO6Q9C0B7 1094 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ECT2Q9H8V3 914 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 RNASELQ05823 741 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 SMCR8Q8TEV9 937 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ARHGEF2Q92974 986 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 THOC1Q96FV9 657 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZSCAN31Q96LW9 406 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 CUX1P39880 1505 aa6.73□□□□□ -1.33
CDC42BPA-201ENST00000334218 OPHN1O60890 802 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ABL1P00519 1130 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 MAN1A1P33908 653 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CA8P35219 290 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 FLT3P36888 993 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CRYMQ14894 314 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZSCAN26Q16670 478 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 USH1GQ495M9 461 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 B3GALT6Q96L58 329 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TUBB6Q9BUF5 446 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CUL7Q14999 1698 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP8B1O43520 1251 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 SYT1P21579 422 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 RFX1P22670 979 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 SYCP2LQ5T4T6 812 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TBC1D22AQ8WUA7 517 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP11BQ9Y2G3 1177 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CHUKO15111 745 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 MTRF1O75570 445 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 PDHA1P08559 390 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 EIF2B5Q13144 721 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP13A5Q4VNC0 1218 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 KRT80Q6KB66 452 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ZNF574Q6ZN55 896 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CNGA4Q8IV77 575 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 BRF1Q92994 677 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 SDCCAG3Q96C92 435 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TRPC7Q9HCX4 862 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 TXNDC16Q9P2K2 825 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 CCDC7Q96M83 1385 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 PDE1BQ01064 536 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 C19orf60Q96EN9 201 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 C8orf76Q96K31 380 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 A0A087WUV0 522 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ENO4A6NNW6 628 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 ATP2B1P20020 1258 aa6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 SRRM1Q8IYB3 904 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 RPAP3Q9H6T3 665 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-201ENST00000334218 AK9Q5TCS8 1911 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms