RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ZSCAN22P10073 491 aaPredicted RBP13.58□□□□□ -0.23
HDAC6-201ENST00000334136 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.23
HDAC6-201ENST00000334136 IFIT1BQ5T764 474 aaKnown RBP13.58□□□□□ -0.23
HDAC6-201ENST00000334136 KIF18AQ8NI77 898 aa13.58□□□□□ -0.23
HDAC6-201ENST00000334136 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.23
HDAC6-201ENST00000334136 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 PRC1O43663 620 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 SULF1Q8IWU6 871 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-201ENST00000334136 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.24
HDAC6-201ENST00000334136 SCARF1Q14162 830 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 DCPSQ96C86 337 aaKnown RBP13.58□□□□□ -0.24
HDAC6-201ENST00000334136 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 MYO3BQ8WXR4 1341 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
HDAC6-201ENST00000334136 CD2BP2O95400 341 aaKnown RBP13.57□□□□□ -0.24
HDAC6-201ENST00000334136 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
HDAC6-201ENST00000334136 GRM1Q13255 1194 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 PDGFDQ9GZP0 370 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-201ENST00000334136 LMBRD1Q9NUN5 540 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 CCDC144CPQ8IYA2 1237 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-201ENST00000334136 SFPQP23246 707 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDAC6-201ENST00000334136 KIF5BP33176 963 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 UVSSAQ2YD98 709 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 AMIGO3Q86WK7 504 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 DOT1LQ8TEK3 1739 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 B4E1Z4 1266 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
HDAC6-201ENST00000334136 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
HDAC6-201ENST00000334136 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-201ENST00000334136 POLLQ9UGP5 575 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
HDAC6-201ENST00000334136 BIN1O00499 593 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 SLC27A2O14975 620 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 CPA1P15085 419 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 CFAP100Q494V2 611 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
HDAC6-201ENST00000334136 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 ARPP21Q9UBL0 812 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-201ENST00000334136 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-201ENST00000334136 CTDSPL2Q05D32 466 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 FBXO33Q7Z6M2 555 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
HDAC6-201ENST00000334136 ZNF445P59923 1031 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 Q6ZUG5 572 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-201ENST00000334136 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 FGAP02671 866 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 STRIP1Q5VSL9 837 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 WASF1Q92558 559 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 PUS7LQ9H0K6 701 aaKnown RBP13.55□□□□□ -0.24
HDAC6-201ENST00000334136 TMX1Q9H3N1 280 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 ZBTB43O43298 467 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 PTGS1P23219 599 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 CRKP46108 304 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 CACNA1FO60840 1977 aa13.55□□□□□ -0.24
HDAC6-201ENST00000334136 METAP2P50579 478 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC6-201ENST00000334136 PTH1RQ03431 593 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-201ENST00000334136 PICK1Q9NRD5 415 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 PPARAQ07869 468 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 CWC15Q9P013 229 aaKnown RBP13.54□□□□□ -0.24
HDAC6-201ENST00000334136 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 KLRK1P26718 216 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 CCDC70Q6NSX1 233 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 LCORLQ8N3X6 602 aa13.54□□□□□ -0.24
HDAC6-201ENST00000334136 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■■■■ 28.7
HDAC6-201ENST00000334136 WDR78Q5VTH9 848 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 GADD45BO75293 160 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-201ENST00000334136 LMNB1P20700 586 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 AKNAD1Q5T1N1 836 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
HDAC6-201ENST00000334136 LRRC37A3O60309 1634 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 PRKAB2O43741 272 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 LEKR1Q6ZMV7 388 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 CLSTN1O94985 981 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 TXNRD3Q86VQ6 643 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
HDAC6-201ENST00000334136 TDRD3Q9H7E2 651 aaKnown RBP13.53□□□□□ -0.24
HDAC6-201ENST00000334136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDAC6-201ENST00000334136 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-201ENST00000334136 M0R2C6 588 aa13.52□□□□□ -0.24
HDAC6-201ENST00000334136 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms