RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 BRD3Q15059 726 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 JPH2Q9BR39 696 aaPredicted RBP12.66□□□□□ -0.38
CCDC87-201ENST00000333861 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
CCDC87-201ENST00000333861 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 POLR2DO15514 142 aaKnown RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 RBL2Q08999 1139 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 GCKRQ14397 625 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 CEP83Q9Y592 693 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 TOM1O60784 492 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 EIF3JO75822 258 aaKnown RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 SCP2P22307 547 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 HNRNPH1P31943 449 aaKnown RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 PDE6BP35913 854 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 KCNV1Q6PIU1 500 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 VPS37DQ86XT2 251 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
CCDC87-201ENST00000333861 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 LTBP4Q8N2S1 1624 aa12.65□□□□□ -0.38
CCDC87-201ENST00000333861 RNMTO43148 476 aaKnown RBP12.65□□□□□ -0.39
CCDC87-201ENST00000333861 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.39
CCDC87-201ENST00000333861 PDIA6Q15084 440 aa12.65□□□□□ -0.39
CCDC87-201ENST00000333861 C1orf141Q5JVX7 400 aa12.65□□□□□ -0.39
CCDC87-201ENST00000333861 IGSF22Q8N9C0 903 aa12.65□□□□□ -0.39
CCDC87-201ENST00000333861 PSMB7Q99436 277 aa12.65□□□□□ -0.39
CCDC87-201ENST00000333861 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.65□□□□□ -0.39
CCDC87-201ENST00000333861 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.39
CCDC87-201ENST00000333861 SLIT3O75094 1523 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 ERCC3P19447 782 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 KCNJ6P48051 423 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 ANTXR2P58335 489 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
CCDC87-201ENST00000333861 MYO1FO00160 1098 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 IFIT1P09914 478 aaKnown RBP12.64□□□□□ -0.39
CCDC87-201ENST00000333861 SLF1Q9BQI6 1058 aa12.64□□□□□ -0.39
CCDC87-201ENST00000333861 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 SNAP23O00161 211 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 PPFIA4O75335 1185 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
CCDC87-201ENST00000333861 FGAP02671 866 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 ATP5JP18859 108 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 EVA1CP58658 441 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 NR5A1Q13285 461 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 KRT40Q6A162 431 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 TUBB4AP04350 444 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 CASP14P31944 242 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC87-201ENST00000333861 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 SMARCAL1Q9NZC9 954 aa12.63□□□□□ -0.39
CCDC87-201ENST00000333861 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 B4E1Z4 1266 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 DNA2P51530 1060 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 KBTBD3Q8NAB2 608 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 VPS16Q9H269 839 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 MKRN1Q9UHC7 482 aaKnown RBP12.62□□□□□ -0.39
CCDC87-201ENST00000333861 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 MAN1B1Q9UKM7 699 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 GUCA1BQ9UMX6 200 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 FAM169AQ9Y6X4 670 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 ERLIN1O75477 346 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
CCDC87-201ENST00000333861 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 CYB5R4Q7L1T6 521 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
CCDC87-201ENST00000333861 BLZF1Q9H2G9 400 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
CCDC87-201ENST00000333861 FOXP2O15409 715 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 CBFA2T2O43439 604 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 GGCXP38435 758 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
CCDC87-201ENST00000333861 TDO2P48775 406 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 FAM71BQ8TC56 605 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 KCNG4Q8TDN1 519 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
CCDC87-201ENST00000333861 HAUS7Q99871 368 aa12.61□□□□□ -0.39
CCDC87-201ENST00000333861 BPIFA3Q9BQP9 254 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms