RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 ZNF654Q8IZM8 581 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 POSTNQ15063 836 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 STAG1Q8WVM7 1258 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 MAP3K14Q99558 947 aa13.41□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 PPARAQ07869 468 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 CATIPQ7Z7H3 387 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 CABP5Q9NP86 173 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 BCL9O00512 1426 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 OGFRQ9NZT2 677 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 METTL16Q86W50 562 aaKnown RBP13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 ZNF397Q8NF99 534 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
CSPG4P4Y-201ENST00000333235 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CHRNDQ07001 517 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 SDR42E1Q8WUS8 393 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 NR5A1Q13285 461 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 DDB1Q16531 1140 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 IFIT1BQ5T764 474 aaKnown RBP13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ELF2Q15723 593 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 SERTAD1Q9UHV2 236 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TNKSO95271 1327 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PTPREP23469 700 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 KCNJ6P48051 423 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 STRCP1A6NGW2 1772 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PCDHB6Q9Y5E3 794 aa13.38□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 URI1O94763 535 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ETF1P62495 437 aaKnown RBP13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 FAM237AA0A1B0GTK4 181 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 KRT2P35908 639 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 KLHL10Q6JEL2 608 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 UBXN4Q92575 508 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 DHX58Q96C10 678 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 KCND1Q9NSA2 647 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 FOXN1O15353 648 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 RCAN1P53805 252 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 SIK1P57059 783 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 DPF2Q92785 391 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 RNF26Q9BY78 433 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ARGLU1Q9NWB6 273 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 VPS54Q9P1Q0 977 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 MAN1B1Q9UKM7 699 aa13.37□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ARHGAP6O43182 974 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 BMP15O95972 392 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GYG1P46976 350 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CTCFLQ8NI51 663 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 AFMP43652 599 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TRIML1Q8N9V2 468 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 BAG1Q99933 345 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 V9GY48 417 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GOLGA6L9A6NEM1 432 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PRDM1O75626 825 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 GTPBP4Q9BZE4 634 aaKnown RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 MYH15Q9Y2K3 1946 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CALM1P0DP23 149 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CALM2P0DP24 149 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 CALM3P0DP25 149 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 FILIP1LQ4L180 1135 aa13.35□□□□□ -0.27
CSPG4P4Y-201ENST00000333235 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms