RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FANCBQ8NB91 859 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.14■□□□□ 0.81
DDX28-201ENST00000332395 IQCB1Q15051 598 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 FAM196AQ6ZSG2 479 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 TXNRD3Q86VQ6 643 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 SPC24Q8NBT2 197 aa20.14■□□□□ 0.81
DDX28-201ENST00000332395 MAST2Q6P0Q8 1798 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 WDHD1O75717 1129 aaPredicted RBP20.13■□□□□ 0.81
DDX28-201ENST00000332395 CMA1P23946 247 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 MARCKSP29966 332 aaPredicted RBP20.13■□□□□ 0.81
DDX28-201ENST00000332395 PRDX5P30044 214 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 NFIXQ14938 502 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 CTR9Q6PD62 1173 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
DDX28-201ENST00000332395 ANO10Q9NW15 660 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 R3HCC1Q9Y3T6 440 aaKnown RBP20.13■□□□□ 0.81
DDX28-201ENST00000332395 IRS2Q9Y4H2 1338 aa20.13■□□□□ 0.81
DDX28-201ENST00000332395 GOLGA6L6A8MZA4 724 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 PPP6R2O75170 966 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 DEXIO95424 95 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
DDX28-201ENST00000332395 PTPAQ15257 358 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 CMTR1Q8N1G2 835 aaKnown RBP20.12■□□□□ 0.81
DDX28-201ENST00000332395 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
DDX28-201ENST00000332395 ZSCAN10Q96SZ4 725 aaPredicted RBP20.12■□□□□ 0.81
DDX28-201ENST00000332395 MAP7D2Q96T17 732 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 AATFQ9NY61 560 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX28-201ENST00000332395 MYH2Q9UKX2 1941 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 MROH7-TTC4A0A0A0MT08 1334 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 MMP1P03956 469 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 FGRP09769 529 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 PLA2G4DQ86XP0 818 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 CCDC82Q8N4S0 544 aa20.12■□□□□ 0.81
DDX28-201ENST00000332395 ENAHQ8N8S7 591 aaPredicted RBP20.12■□□□□ 0.81
DDX28-201ENST00000332395 USP17L12C9JPN9 530 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 USP17L21D6R901 530 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 TPM3P06753 285 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 PFKFB1P16118 471 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 CNBD1Q8NA66 436 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 CRNKL1Q9BZJ0 848 aaKnown RBP20.11■□□□□ 0.81
DDX28-201ENST00000332395 TRIM5Q9C035 493 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 AFF2P51816 1311 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 A0A087WWV3 80 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 GOLGA6L19H0YKK7 550 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 PRDM1O75626 825 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 ZNF202O95125 648 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 ZNF75DP51815 510 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 GRAPQ13588 217 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDX28-201ENST00000332395 NOSTRINQ8IVI9 506 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
DDX28-201ENST00000332395 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 DCP1AQ9NPI6 582 aaPredicted RBP20.11■□□□□ 0.81
DDX28-201ENST00000332395 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 CCDC88AQ3V6T2 1871 aa20.11■□□□□ 0.81
DDX28-201ENST00000332395 ZBTB22O15209 634 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 ONECUT3O60422 494 aaPredicted RBP20.1■□□□□ 0.81
DDX28-201ENST00000332395 PPP2R5BQ15173 497 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 TMED8Q6PL24 325 aaPredicted RBP20.1■□□□□ 0.81
DDX28-201ENST00000332395 IQCA1Q86XH1 822 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 DIS3L2Q8IYB7 885 aaKnown RBP20.1■□□□□ 0.81
DDX28-201ENST00000332395 KIAA1468Q9P260 1216 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 ANKIB1Q9P2G1 1089 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 KCNJ14Q9UNX9 436 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 JAG2Q9Y219 1238 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 BTBD18B2RXH4 712 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 RBM10P98175 930 aaKnown RBP20.1■□□□□ 0.81
DDX28-201ENST00000332395 IFIT1BQ5T764 474 aaKnown RBP20.1■□□□□ 0.81
DDX28-201ENST00000332395 SEPT12Q8IYM1 358 aa20.1■□□□□ 0.81
DDX28-201ENST00000332395 LAMB1P07942 1786 aa20.09■□□□□ 0.81
DDX28-201ENST00000332395 CEP57L1Q8IYX8 460 aa20.09■□□□□ 0.81
DDX28-201ENST00000332395 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
DDX28-201ENST00000332395 KCNF1Q9H3M0 494 aa20.09■□□□□ 0.81
DDX28-201ENST00000332395 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.09■□□□□ 0.81
DDX28-201ENST00000332395 ATP8A2Q9NTI2 1148 aa20.09■□□□□ 0.81
DDX28-201ENST00000332395 ADRA2BP18089 450 aa20.08■□□□□ 0.81
DDX28-201ENST00000332395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.08■□□□□ 0.81
DDX28-201ENST00000332395 SLC51AQ86UW1 340 aa20.08■□□□□ 0.81
DDX28-201ENST00000332395 RNF26Q9BY78 433 aaPredicted RBP20.08■□□□□ 0.81
DDX28-201ENST00000332395 FOXP1Q9H334 677 aaPredicted RBP20.08■□□□□ 0.81
DDX28-201ENST00000332395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDX28-201ENST00000332395 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
DDX28-201ENST00000332395 DLEC1Q9Y238 1755 aa20.08■□□□□ 0.81
DDX28-201ENST00000332395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.8
DDX28-201ENST00000332395 BECN2A8MW95 431 aa20.08■□□□□ 0.8
DDX28-201ENST00000332395 SLC3A2P08195 630 aaKnown RBP20.08■□□□□ 0.8
DDX28-201ENST00000332395 EVX2Q03828 476 aa20.08■□□□□ 0.8
DDX28-201ENST00000332395 SPTY2D1Q68D10 685 aaPredicted RBP20.08■□□□□ 0.8
DDX28-201ENST00000332395 SHC4Q6S5L8 630 aa20.08■□□□□ 0.8
DDX28-201ENST00000332395 CATIPQ7Z7H3 387 aa20.08■□□□□ 0.8
DDX28-201ENST00000332395 DZIP1Q86YF9 867 aaKnown RBP20.08■□□□□ 0.8
DDX28-201ENST00000332395 DHX40Q8IX18 779 aaKnown RBP20.08■□□□□ 0.8
DDX28-201ENST00000332395 ORC4O43929 436 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 SARM1Q6SZW1 724 aa20.07■□□□□ 0.8
DDX28-201ENST00000332395 NAT10Q9H0A0 1025 aaKnown RBP20.07■□□□□ 0.8
DDX28-201ENST00000332395 ARPP21Q9UBL0 812 aaPredicted RBP20.07■□□□□ 0.8
DDX28-201ENST00000332395 HPSEQ9Y251 543 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms