RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 FMNL1O95466 1100 aaPredicted RBP16.26■□□□□ 0.19
TRAIP-201ENST00000331456 PHKBQ93100 1093 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
TRAIP-201ENST00000331456 MCM9Q9NXL9 1143 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAIP-201ENST00000331456 ANKRD31Q8N7Z5 1873 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 MROH7-TTC4A0A0A0MT08 1334 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
TRAIP-201ENST00000331456 LAMB1P07942 1786 aa16.25■□□□□ 0.19
TRAIP-201ENST00000331456 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
TRAIP-201ENST00000331456 CEBPZQ03701 1054 aaKnown RBP16.25■□□□□ 0.19
TRAIP-201ENST00000331456 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
TRAIP-201ENST00000331456 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
TRAIP-201ENST00000331456 USP28Q96RU2 1077 aa16.25■□□□□ 0.19
TRAIP-201ENST00000331456 SLC26A6Q9BXS9 759 aa16.25■□□□□ 0.19
TRAIP-201ENST00000331456 CALM1P0DP23 149 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 CALM2P0DP24 149 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 CALM3P0DP25 149 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 KIF23Q02241 960 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-201ENST00000331456 CATIPQ7Z7H3 387 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 MASTLQ96GX5 879 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 NUP62CLQ9H1M0 184 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 TNS1Q9HBL0 1735 aaKnown RBP16.24■□□□□ 0.19
TRAIP-201ENST00000331456 PRDM1O75626 825 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 PLCG2P16885 1265 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 LIG1P18858 919 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
TRAIP-201ENST00000331456 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 KRT40Q6A162 431 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 MPNDQ8N594 471 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 ENAHQ8N8S7 591 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-201ENST00000331456 SH3RF3Q8TEJ3 882 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-201ENST00000331456 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
TRAIP-201ENST00000331456 SMIM22K7EJ46 135 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 MFSD14BQ5SR56 506 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 FAM205AQ6ZU69 1335 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 LTBP1Q14766 1721 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 GRIK5Q16478 980 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 C12orf60Q5U649 245 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
TRAIP-201ENST00000331456 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
TRAIP-201ENST00000331456 DDAH1O94760 285 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 DEXIO95424 95 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 YEATS4O95619 227 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
TRAIP-201ENST00000331456 CYP2D6P10635 497 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 MAP3K11Q16584 847 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
TRAIP-201ENST00000331456 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
TRAIP-201ENST00000331456 POLR3EQ9NVU0 708 aa16.22■□□□□ 0.19
TRAIP-201ENST00000331456 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
TRAIP-201ENST00000331456 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
TRAIP-201ENST00000331456 GPR75-ASB3A0A0A6YYF3 556 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 RIMBP2O15034 1052 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 USP17L8P0C7I0 530 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 BTDP43251 543 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 ME1P48163 572 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.19
TRAIP-201ENST00000331456 STK38Q15208 465 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAIP-201ENST00000331456 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
TRAIP-201ENST00000331456 MSL1Q68DK7 614 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 CRACR2BQ8N4Y2 399 aaPredicted RBP16.21■□□□□ 0.19
TRAIP-201ENST00000331456 KCNG4Q8TDN1 519 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 FAM163AQ96GL9 167 aaPredicted RBP16.21■□□□□ 0.19
TRAIP-201ENST00000331456 FTOQ9C0B1 505 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAIP-201ENST00000331456 TNMDQ9H2S6 317 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 GJB4Q9NTQ9 266 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
TRAIP-201ENST00000331456 TSPY2A6NKD2 308 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 RNF214Q8ND24 703 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 PPP1R9BQ96SB3 815 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 EYA3Q99504 573 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 CLSTN2Q9H4D0 955 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 SUGT1Q9Y2Z0 365 aa16.21■□□□□ 0.18
TRAIP-201ENST00000331456 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 KIF28PB7ZC32 967 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 CCDC192P0DO97 292 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 UVSSAQ2YD98 709 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 CCAR1Q8IX12 1150 aaKnown RBP16.2■□□□□ 0.18
TRAIP-201ENST00000331456 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRAIP-201ENST00000331456 TRIM44Q96DX7 344 aaPredicted RBP16.2■□□□□ 0.18
TRAIP-201ENST00000331456 RNF26Q9BY78 433 aaPredicted RBP16.2■□□□□ 0.18
TRAIP-201ENST00000331456 ZNF287Q9HBT7 754 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
TRAIP-201ENST00000331456 EP400Q96L91 3159 aa16.19■□□□□ 0.18
TRAIP-201ENST00000331456 G3V3G9 751 aa16.19■□□□□ 0.18
TRAIP-201ENST00000331456 GTF2IP78347 998 aa16.19■□□□□ 0.18
TRAIP-201ENST00000331456 FAM47AQ5JRC9 791 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms