RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 CDK5RAP2Q96SN8 1893 aa30.77■■■□□ 2.52
PPP4R4-202ENST00000328839 RNF208Q9H0X6 261 aa30.77■■■□□ 2.52
PPP4R4-202ENST00000328839 TNNI3KQ59H18 835 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 CCDC158Q5M9N0 1113 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 NAA16Q6N069 864 aaPredicted RBP30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 SLAIN1Q8ND83 568 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 NKX2-3Q8TAU0 364 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 C1orf115Q9H7X2 142 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 FPGT-TNNI3KV9GXZ4 949 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 LOC285556D6RIA3 1793 aa30.76■■■□□ 2.51
PPP4R4-202ENST00000328839 TNPO2O14787 897 aaKnown RBP30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 SPP2Q13103 211 aa30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 POLA2Q14181 598 aa30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 TREML2Q5T2D2 321 aa30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 FTSJ3Q8IY81 847 aaKnown RBP30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 ANKRD13CQ8N6S4 541 aa30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 DBNDD2Q9BQY9 259 aa30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 AATFQ9NY61 560 aaKnown RBP eCLIP30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 PNMA3Q9UL41 463 aa30.75■■■□□ 2.51
PPP4R4-202ENST00000328839 SURF6O75683 361 aaKnown RBP30.74■■■□□ 2.51
PPP4R4-202ENST00000328839 SIPA1L1O43166 1804 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 FOCADQ5VW36 1801 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 ADCY3O60266 1144 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 BAG3O95817 575 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 FLT3LGP49771 235 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 ATP8B2P98198 1209 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 ZNF280CQ8ND82 737 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 SSH3Q8TE77 659 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 GPR108Q9NPR9 543 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 TAOK2Q9UL54 1235 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 DOCK3Q8IZD9 2030 aa30.73■■■□□ 2.51
PPP4R4-202ENST00000328839 GJB1P08034 283 aa30.72■■■□□ 2.51
PPP4R4-202ENST00000328839 CAP2P40123 477 aa30.72■■■□□ 2.51
PPP4R4-202ENST00000328839 HNRNPUQ00839 825 aaKnown RBP eCLIP30.72■■■□□ 2.51
PPP4R4-202ENST00000328839 ITPRIPQ8IWB1 547 aa30.72■■■□□ 2.51
PPP4R4-202ENST00000328839 PROCA1Q8NCQ7 364 aaPredicted RBP30.72■■■□□ 2.51
PPP4R4-202ENST00000328839 GJA8P48165 433 aa30.71■■■□□ 2.51
PPP4R4-202ENST00000328839 HMGCS2P54868 508 aa30.71■■■□□ 2.51
PPP4R4-202ENST00000328839 DPF3Q92784 378 aa30.71■■■□□ 2.51
PPP4R4-202ENST00000328839 HERC5Q9UII4 1024 aaKnown RBP30.71■■■□□ 2.51
PPP4R4-202ENST00000328839 USP17L5A8MUK1 530 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 H0YGN5 161 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 ELNP15502 786 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 PLCG2P16885 1265 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 RRP1BQ14684 758 aaKnown RBP30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 MAPKAPK5Q8IW41 473 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 TGFBRAP1Q8WUH2 860 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 TBC1D2Q9BYX2 928 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 UNC93B1Q9H1C4 597 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 PI4KBQ9UBF8 816 aa30.7■■■□□ 2.51
PPP4R4-202ENST00000328839 COA7Q96BR5 231 aa30.69■■■□□ 2.5
PPP4R4-202ENST00000328839 DHX36Q9H2U1 1008 aaKnown RBP30.69■■■□□ 2.5
PPP4R4-202ENST00000328839 AS3MTQ9HBK9 375 aa30.69■■■□□ 2.5
PPP4R4-202ENST00000328839 COLQQ9Y215 455 aaPredicted RBP30.69■■■□□ 2.5
PPP4R4-202ENST00000328839 CYP2E1P05181 493 aaPredicted RBP30.68■■■□□ 2.5
PPP4R4-202ENST00000328839 PABPC4Q13310 644 aaKnown RBP eCLIP30.68■■■□□ 2.5
PPP4R4-202ENST00000328839 TRIM34Q9BYJ4 488 aa30.68■■■□□ 2.5
PPP4R4-202ENST00000328839 INHAP05111 366 aa30.67■■■□□ 2.5
PPP4R4-202ENST00000328839 ZAP70P43403 619 aa30.67■■■□□ 2.5
PPP4R4-202ENST00000328839 FAM110CQ1W6H9 321 aa30.67■■■□□ 2.5
PPP4R4-202ENST00000328839 ADGRA1Q86SQ6 560 aa30.67■■■□□ 2.5
PPP4R4-202ENST00000328839 U2AF1L4Q8WU68 220 aaKnown RBP30.67■■■□□ 2.5
PPP4R4-202ENST00000328839 CRACR2BQ8N4Y2 399 aaPredicted RBP30.66■■■□□ 2.5
PPP4R4-202ENST00000328839 FLT1P17948 1338 aa30.66■■■□□ 2.5
PPP4R4-202ENST00000328839 CEP290O15078 2479 aa30.65■■■□□ 2.5
PPP4R4-202ENST00000328839 IRF5Q13568 498 aa30.65■■■□□ 2.5
PPP4R4-202ENST00000328839 PXYLP1Q8TE99 480 aa30.65■■■□□ 2.5
PPP4R4-202ENST00000328839 CCDC8Q9H0W5 538 aaPredicted RBP30.65■■■□□ 2.5
PPP4R4-202ENST00000328839 PIH1D3Q9NQM4 214 aaKnown RBP30.65■■■□□ 2.5
PPP4R4-202ENST00000328839 TLR7Q9NYK1 1049 aaKnown RBP30.65■■■□□ 2.5
PPP4R4-202ENST00000328839 RLBP1P12271 317 aa30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 GCLCP48506 637 aaPredicted RBP30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 PPP4CP60510 307 aa30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 HTATIP2Q9BUP3 242 aa30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 ASCC2Q9H1I8 757 aaPredicted RBP30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 DBNLQ9UJU6 430 aaKnown RBP30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 PALD1Q9ULE6 856 aa30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 MYH1P12882 1939 aa30.64■■■□□ 2.5
PPP4R4-202ENST00000328839 FARP2O94887 1054 aaPredicted RBP30.63■■■□□ 2.49
PPP4R4-202ENST00000328839 MTMR2Q13614 643 aa30.63■■■□□ 2.49
PPP4R4-202ENST00000328839 ZNF512BQ96KM6 892 aaPredicted RBP30.63■■■□□ 2.49
PPP4R4-202ENST00000328839 SAP30BPQ9UHR5 308 aaKnown RBP30.63■■■□□ 2.49
PPP4R4-202ENST00000328839 NOP58Q9Y2X3 529 aaKnown RBP30.63■■■□□ 2.49
PPP4R4-202ENST00000328839 ZBTB7BO15156 539 aaPredicted RBP30.62■■■□□ 2.49
PPP4R4-202ENST00000328839 SGPL1O95470 568 aa30.62■■■□□ 2.49
PPP4R4-202ENST00000328839 ASNSP08243 561 aa30.62■■■□□ 2.49
PPP4R4-202ENST00000328839 FXR1P51114 621 aaKnown RBP eCLIP30.62■■■□□ 2.49
PPP4R4-202ENST00000328839 SH3D19Q5HYK7 790 aa30.62■■■□□ 2.49
PPP4R4-202ENST00000328839 IDH1O75874 414 aaKnown RBP30.61■■■□□ 2.49
PPP4R4-202ENST00000328839 GDF11O95390 407 aa30.61■■■□□ 2.49
PPP4R4-202ENST00000328839 CYP7A1P22680 504 aa30.61■■■□□ 2.49
PPP4R4-202ENST00000328839 DYNLL1P63167 89 aaKnown RBP30.61■■■□□ 2.49
PPP4R4-202ENST00000328839 DNAJC18Q9H819 358 aa30.61■■■□□ 2.49
PPP4R4-202ENST00000328839 TMOD4Q9NZQ9 345 aa30.61■■■□□ 2.49
PPP4R4-202ENST00000328839 TFRCP02786 760 aaKnown RBP30.6■■■□□ 2.49
PPP4R4-202ENST00000328839 HLA-DOAP06340 250 aa30.6■■■□□ 2.49
PPP4R4-202ENST00000328839 IRX3P78415 501 aaPredicted RBP30.6■■■□□ 2.49
PPP4R4-202ENST00000328839 CHRDL2Q6WN34 429 aa30.6■■■□□ 2.49
PPP4R4-202ENST00000328839 UBE2Q1Q7Z7E8 422 aa30.6■■■□□ 2.49
PPP4R4-202ENST00000328839 FOXP4Q8IVH2 680 aaPredicted RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms