RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 KDM6AO15550 1401 aaPredicted RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 PTPREP23469 700 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 TIMM10P62072 90 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 MTF1Q14872 753 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 PTPN21Q16825 1174 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 CPLX2Q6PUV4 134 aaKnown RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 ITIH6Q6UXX5 1313 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 PLBD2Q8NHP8 589 aa12.84□□□□□ -0.35
GINS3-202ENST00000328514 EIF3CQ99613 913 aaKnown RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 GEMIN8Q9NWZ8 242 aaKnown RBP12.84□□□□□ -0.35
GINS3-202ENST00000328514 EYA2O00167 538 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
GINS3-202ENST00000328514 VSNL1P62760 191 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 NTRK3Q16288 839 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 HSP90B2PQ58FF3 399 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 STK11IPQ8N1F8 1099 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
GINS3-202ENST00000328514 APPBP2Q92624 585 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.36
GINS3-202ENST00000328514 CTAGE15A4D2H0 777 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 N4BP1O75113 896 aaKnown RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 MFAP3LO75121 409 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 PPFIA4O75335 1185 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 CTAGE8P0CG41 777 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
GINS3-202ENST00000328514 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 LRRC31Q6UY01 552 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 CTAGE6Q86UF2 777 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 PPFIBP1Q86W92 1011 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 CNGA4Q8IV77 575 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 CTAGE4Q8IX94 777 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 LZTFL1Q9NQ48 299 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 ADD3Q9UEY8 706 aaKnown RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 FBXO2Q9UK22 296 aaPredicted RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 NID2Q14112 1375 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 ZNF213O14771 459 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 FOXN1O15353 648 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 KCNA6P17658 529 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 GUCY2CP25092 1073 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 HAND2P61296 217 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 AMPD2Q01433 879 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 ZNF569Q5MCW4 686 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 CDKAL1Q5VV42 579 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 SAMSN1Q9NSI8 373 aaKnown RBP12.82□□□□□ -0.36
GINS3-202ENST00000328514 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
GINS3-202ENST00000328514 ECM29Q5VYK3 1845 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 RBL2Q08999 1139 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 APOA5Q6Q788 366 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 PACS2Q86VP3 889 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 SGMS1Q86VZ5 419 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 TMTC1Q8IUR5 882 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 EFCAB13Q8IY85 973 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 IGSF22Q8N9C0 903 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
GINS3-202ENST00000328514 TMEM87BQ96K49 555 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 ZSWIM4Q9H7M6 989 aa12.81□□□□□ -0.36
GINS3-202ENST00000328514 ACTN4O43707 911 aaKnown RBP12.8□□□□□ -0.36
GINS3-202ENST00000328514 PRPF6O94906 941 aaKnown RBP12.8□□□□□ -0.36
GINS3-202ENST00000328514 MCM3P25205 808 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 TRIM29Q14134 588 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 FOXR1Q6PIV2 292 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 SUGP1Q8IWZ8 645 aaKnown RBP12.8□□□□□ -0.36
GINS3-202ENST00000328514 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 SUGCTQ9HAC7 445 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
GINS3-202ENST00000328514 WWC3Q9ULE0 1092 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 ATRNO75882 1429 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 PARP4Q9UKK3 1724 aaKnown RBP12.8□□□□□ -0.36
GINS3-202ENST00000328514 TEX33O43247 280 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 GCP02774 474 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
GINS3-202ENST00000328514 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
GINS3-202ENST00000328514 TRDNQ13061 729 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 CUL4BQ13620 913 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 RILPL1Q5EBL4 403 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 SLC35F6Q8N357 371 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 TBC1D2BQ9UPU7 963 aa12.8□□□□□ -0.36
GINS3-202ENST00000328514 MST1RQ04912 1400 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 TJP1Q07157 1748 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 TARSL2A2RTX5 802 aaKnown RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 LRRC10BA6NIK2 292 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 LRRIQ3A6PVS8 624 aaPredicted RBP12.79□□□□□ -0.36
GINS3-202ENST00000328514 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
GINS3-202ENST00000328514 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms