RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 HDLBPQ00341 1268 aaKnown RBP6.37□□□□□ -1.39
SKP1-201ENST00000328392 HNRNPUQ00839 825 aaKnown RBP eCLIP6.37□□□□□ -1.39
SKP1-201ENST00000328392 CPSF6Q16630 551 aaKnown RBP eCLIP6.37□□□□□ -1.39
SKP1-201ENST00000328392 NFXL1Q6ZNB6 911 aa6.37□□□□□ -1.39
SKP1-201ENST00000328392 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
SKP1-201ENST00000328392 OAS3Q9Y6K5 1087 aaKnown RBP6.37□□□□□ -1.39
SKP1-201ENST00000328392 GP2P55259 537 aaKnown RBP6.36□□□□□ -1.39
SKP1-201ENST00000328392 CYP27A1Q02318 531 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 SEPT6Q14141 434 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
SKP1-201ENST00000328392 ZBTB37Q5TC79 503 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 PLPPR2Q96GM1 343 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 DUSP23Q9BVJ7 150 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 PICK1Q9NRD5 415 aa6.36□□□□□ -1.39
SKP1-201ENST00000328392 RBAK-RBAKDNI3L0D1 243 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 WNT11O96014 354 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 ERCC5P28715 1186 aaPredicted RBP6.35□□□□□ -1.39
SKP1-201ENST00000328392 LIG3P49916 1009 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 FANCCQ00597 558 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 NT5DC4Q86YG4 428 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 RNF34Q969K3 372 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 GGT7Q9UJ14 662 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 PCDHGB7Q9Y5F8 929 aa6.35□□□□□ -1.39
SKP1-201ENST00000328392 PRAMEF27A3QJZ7 478 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 CYP27C1Q4G0S4 372 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 ZNF394Q53GI3 561 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 SCARA3Q6AZY7 606 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 AGMOQ6ZNB7 445 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 CYFIP1Q7L576 1253 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 IGSF5Q9NSI5 407 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 TLR6Q9Y2C9 796 aa6.34□□□□□ -1.39
SKP1-201ENST00000328392 USP31Q70CQ4 1352 aa6.33□□□□□ -1.4
SKP1-201ENST00000328392 FANCGO15287 622 aa6.33□□□□□ -1.4
SKP1-201ENST00000328392 TFE3P19532 575 aaPredicted RBP6.33□□□□□ -1.4
SKP1-201ENST00000328392 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
SKP1-201ENST00000328392 WIPI1Q5MNZ9 446 aaPredicted RBP6.33□□□□□ -1.4
SKP1-201ENST00000328392 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
SKP1-201ENST00000328392 FBRSQ9HAH7 460 aa6.33□□□□□ -1.4
SKP1-201ENST00000328392 COPRSQ9NQ92 184 aa6.33□□□□□ -1.4
SKP1-201ENST00000328392 BSDC1Q9NW68 430 aaPredicted RBP6.33□□□□□ -1.4
SKP1-201ENST00000328392 PRNPP04156 253 aa6.32□□□□□ -1.4
SKP1-201ENST00000328392 NKG7Q16617 165 aa6.32□□□□□ -1.4
SKP1-201ENST00000328392 FAM214BQ7L5A3 538 aa6.32□□□□□ -1.4
SKP1-201ENST00000328392 HS2ST1Q7LGA3 356 aa6.32□□□□□ -1.4
SKP1-201ENST00000328392 HDXQ7Z353 690 aa6.32□□□□□ -1.4
SKP1-201ENST00000328392 HEXIM2Q96MH2 286 aaKnown RBP6.32□□□□□ -1.4
SKP1-201ENST00000328392 MINDY4BA8MYZ0 360 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 GFRA2O00451 464 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 ST13P50502 369 aaKnown RBP6.31□□□□□ -1.4
SKP1-201ENST00000328392 CDC37L1Q7L3B6 337 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 METTL16Q86W50 562 aaKnown RBP6.31□□□□□ -1.4
SKP1-201ENST00000328392 ABI1Q8IZP0 508 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
SKP1-201ENST00000328392 WNT10AQ9GZT5 417 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
SKP1-201ENST00000328392 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
SKP1-201ENST00000328392 CNTNAP4Q9C0A0 1308 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 TNNI2P48788 182 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 OXCT1P55809 520 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 BNIP3Q12983 259 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 SLBPQ14493 270 aaKnown RBP eCLIP6.3□□□□□ -1.4
SKP1-201ENST00000328392 ZNF574Q6ZN55 896 aaPredicted RBP6.3□□□□□ -1.4
SKP1-201ENST00000328392 SPRED2Q7Z698 418 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 USP48Q86UV5 1035 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 VSIG10LQ86VR7 867 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 WFDC3Q8IUB2 231 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 NOC4LQ9BVI4 516 aaKnown RBP6.3□□□□□ -1.4
SKP1-201ENST00000328392 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 CCSER2Q9H7U1 834 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
SKP1-201ENST00000328392 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 PLAGL2Q9UPG8 496 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 SNCAIPQ9Y6H5 919 aa6.3□□□□□ -1.4
SKP1-201ENST00000328392 LMNB1P20700 586 aa6.29□□□□□ -1.4
SKP1-201ENST00000328392 GRK4P32298 578 aa6.29□□□□□ -1.4
SKP1-201ENST00000328392 GBP2P32456 591 aaPredicted RBP6.29□□□□□ -1.4
SKP1-201ENST00000328392 CD96P40200 585 aa6.29□□□□□ -1.4
SKP1-201ENST00000328392 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
SKP1-201ENST00000328392 FLCNQ8NFG4 579 aa6.29□□□□□ -1.4
SKP1-201ENST00000328392 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
SKP1-201ENST00000328392 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
SKP1-201ENST00000328392 SLITRK5O94991 958 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 EOMESO95936 686 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 ITIH2P19823 946 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 IRAK1P51617 712 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
SKP1-201ENST00000328392 FAM160A1Q05DH4 1040 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 BNC2Q6ZN30 1099 aaPredicted RBP6.28□□□□□ -1.4
SKP1-201ENST00000328392 TP53INP2Q8IXH6 220 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
SKP1-201ENST00000328392 RIN3Q8TB24 985 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms