RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 G3V3G9 751 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 SERPINC1P01008 464 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 ERCC3P19447 782 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 NAA30Q147X3 362 aaPredicted RBP12.29□□□□□ -0.44
CUL4A-201ENST00000326335 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 RPGRQ92834 1020 aaKnown RBP12.29□□□□□ -0.44
CUL4A-201ENST00000326335 UFL1O94874 794 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 FANCBQ8NB91 859 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 CACTINQ8WUQ7 758 aaKnown RBP12.29□□□□□ -0.44
CUL4A-201ENST00000326335 CPLX3Q8WVH0 158 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 ESR2Q92731 530 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 FAM217BQ9NTX9 383 aaPredicted RBP12.29□□□□□ -0.44
CUL4A-201ENST00000326335 ELP1O95163 1332 aa12.29□□□□□ -0.44
CUL4A-201ENST00000326335 CDKL5O76039 1030 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 ZNF75DP51815 510 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
CUL4A-201ENST00000326335 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
CUL4A-201ENST00000326335 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 ENAHQ8N8S7 591 aaPredicted RBP12.28□□□□□ -0.44
CUL4A-201ENST00000326335 ZNF384Q8TF68 577 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 MCM7P33993 719 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 KRT23Q9C075 422 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 ZNF804BA4D1E1 1349 aa12.28□□□□□ -0.44
CUL4A-201ENST00000326335 USP27XA6NNY8 438 aa12.27□□□□□ -0.44
CUL4A-201ENST00000326335 SCNN1DP51172 638 aa12.27□□□□□ -0.44
CUL4A-201ENST00000326335 DOK7Q18PE1 504 aa12.27□□□□□ -0.44
CUL4A-201ENST00000326335 CATIPQ7Z7H3 387 aa12.27□□□□□ -0.44
CUL4A-201ENST00000326335 ANO10Q9NW15 660 aa12.27□□□□□ -0.44
CUL4A-201ENST00000326335 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.44
CUL4A-201ENST00000326335 VWA3AA6NCI4 1184 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 WNT7AO00755 349 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 ADAMTS3O15072 1205 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
CUL4A-201ENST00000326335 EPSTI1Q96J88 318 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 TFAP4Q01664 338 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 UVSSAQ2YD98 709 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 SHC4Q6S5L8 630 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 PIK3AP1Q6ZUJ8 805 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 KCNG4Q8TDN1 519 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.45
CUL4A-201ENST00000326335 CACNB3P54284 484 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 NLRP5P59047 1200 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 ADALQ6DHV7 355 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 FMR1NBQ8N0W7 255 aaPredicted RBP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 SH3RF3Q8TEJ3 882 aaPredicted RBP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 BLZF1Q9H2G9 400 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 JCADQ9P266 1359 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 AGXT2Q9BYV1 514 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 XPO4Q9C0E2 1151 aaKnown RBP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 ALDH8A1Q9H2A2 487 aaPredicted RBP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 RTEL1Q9NZ71 1219 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 MYH14Q7Z406 1995 aaKnown RBP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 PARP4Q9UKK3 1724 aaKnown RBP12.26□□□□□ -0.45
CUL4A-201ENST00000326335 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 CTR9Q6PD62 1173 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 SERTAD1Q9UHV2 236 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 ROBO1Q9Y6N7 1651 aa12.26□□□□□ -0.45
CUL4A-201ENST00000326335 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 SLIT2O94813 1529 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-201ENST00000326335 KCNH3Q9ULD8 1083 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
CUL4A-201ENST00000326335 SKILP12757 684 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 HEATR3Q7Z4Q2 680 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 STAG2Q8N3U4 1231 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 CTCFLQ8NI51 663 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-201ENST00000326335 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-201ENST00000326335 CDCA7Q9BWT1 371 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-201ENST00000326335 RBM5P52756 815 aaKnown RBP eCLIP12.25□□□□□ -0.452e-8■■■■■ 30
CUL4A-201ENST00000326335 NTRK3Q16288 839 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 CNNM2Q9H8M5 875 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 PRDM10Q9NQV6 1147 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 PCDHA5Q9Y5H7 936 aa12.25□□□□□ -0.45
CUL4A-201ENST00000326335 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.457e-6■■■■□ 22.7
CUL4A-201ENST00000326335 NOL10Q9BSC4 688 aaKnown RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 SCAF8Q9UPN6 1271 aaKnown RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 COL4A1P02462 1669 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 PRKCSHP14314 528 aaPredicted RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 HSPA1LP34931 641 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 GTF2IP78347 998 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 TCP10Q12799 353 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 ENGASEQ8NFI3 743 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 NSUN4Q96CB9 384 aaKnown RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 GLI3P10071 1580 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms