RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 TUBE1Q9UJT0 475 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 HPSEQ9Y251 543 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 COL22A1Q8NFW1 1626 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 B4E1Z4 1266 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 EIF3CLB5ME19 914 aaKnown RBP20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 TMEM232C9JQI7 657 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 MAP2K2P36507 400 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 CFAP100Q494V2 611 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 METTL24Q5JXM2 366 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 ANKRD20A12PQ8NF67 263 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 CEP89Q96ST8 783 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 EIF3CQ99613 913 aaKnown RBP20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 DNAI1Q9UI46 699 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 C4AP0C0L4 1744 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 C4BP0C0L5 1744 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 SH2B2O14492 632 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 NRDCO43847 1150 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 LMAN1P49257 510 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 SPECC1Q5M775 1068 aa20.69■□□□□ 0.9
TRAPPC12-201ENST00000324266 PCDH11XQ9BZA7 1347 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 PCDH11YQ9BZA8 1340 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 IRF6O14896 467 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 APOA5Q6Q788 366 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 MMS22LQ6ZRQ5 1243 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 FOXP4Q8IVH2 680 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 FAM212AQ96EL1 285 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 MAP3K14Q99558 947 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.68■□□□□ 0.91e-6■□□□□ 10.1
TRAPPC12-201ENST00000324266 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 IDH1O75874 414 aaKnown RBP20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 ADD2P35612 726 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 MYL5Q02045 173 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 METTL16Q86W50 562 aaKnown RBP20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 PIH1D3Q9NQM4 214 aaKnown RBP20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 FANCLQ9NW38 375 aa20.68■□□□□ 0.9
TRAPPC12-201ENST00000324266 FOXN1O15353 648 aa20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 MAP2K1Q02750 393 aaPredicted RBP20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 SGSM3Q96HU1 749 aa20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 FANCGO15287 622 aa20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 KCNJ6P48051 423 aa20.67■□□□□ 0.9
TRAPPC12-201ENST00000324266 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.67■□□□□ 0.97e-8■■□□□ 12.3
TRAPPC12-201ENST00000324266 PPP6R2O75170 966 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 ETF1P62495 437 aaKnown RBP20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 SMC1AQ14683 1233 aaKnown RBP20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 LDHAL6AQ6ZMR3 332 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 NFXL1Q6ZNB6 911 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 WDR19Q8NEZ3 1342 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 DDX60Q8IY21 1712 aaKnown RBP20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 GPTP24298 496 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 PDE4BQ07343 736 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 RESP18Q5W5W9 173 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 LEKR1Q6ZMV7 388 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 RIC1Q4ADV7 1423 aa20.66■□□□□ 0.9
TRAPPC12-201ENST00000324266 JMYQ8N9B5 988 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 GREM2Q9H772 168 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 RIPOR2Q9Y4F9 1068 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 PCDHA5Q9Y5H7 936 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 MYH7P12883 1935 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 SEC31AO94979 1220 aaKnown RBP20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 CPP00450 1065 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 PCCAP05165 728 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 CSF1RP07333 972 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 BMP6P22004 513 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 TRIM65Q6PJ69 517 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 FAM43BQ6ZT52 329 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 FAM177A1Q8N128 213 aaPredicted RBP20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 CNNM3Q8NE01 707 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 FBXO3Q9UK99 471 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 ADAM21Q9UKJ8 722 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 ZNF532Q9HCE3 1301 aa20.65■□□□□ 0.9
TRAPPC12-201ENST00000324266 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 CCDC196A0A1B0GTZ2 297 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 ZBTB43O43298 467 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 CDKL5O76039 1030 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 ITGA6P23229 1130 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 NTRK3Q16288 839 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 VSTM4Q8IW00 320 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 FAM217BQ9NTX9 383 aaPredicted RBP20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 KCNH3Q9ULD8 1083 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 WWC3Q9ULE0 1092 aa20.64■□□□□ 0.9
TRAPPC12-201ENST00000324266 GOLGA8AA7E2F4 631 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 TOP1P11387 765 aaKnown RBP20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 CORO7P57737 925 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 CPLX2Q6PUV4 134 aaKnown RBP20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 OLFM4Q6UX06 510 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 STK11IPQ8N1F8 1099 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 IGDCC4Q8TDY8 1250 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 SLC26A6Q9BXS9 759 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 INTS13Q9NVM9 706 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 UBN2Q6ZU65 1347 aa20.64■□□□□ 0.89
TRAPPC12-201ENST00000324266 UBR2Q8IWV8 1755 aa20.63■□□□□ 0.89
TRAPPC12-201ENST00000324266 CBFA2T2O43439 604 aa20.63■□□□□ 0.89
TRAPPC12-201ENST00000324266 SASH3O75995 380 aa20.63■□□□□ 0.89
TRAPPC12-201ENST00000324266 LRCH2Q5VUJ6 765 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms