RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 DTNBO60941 627 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 GOLGA6DP0CG33 693 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 GOLGA6AQ9NYA3 693 aa10.79□□□□□ -0.68
COL12A1-201ENST00000322507 SCHIP1Q9P0W5 487 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-201ENST00000322507 EXOC5O00471 708 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 ZBTB41Q5SVQ8 909 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 SLC26A6Q9BXS9 759 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 HOXC8P31273 242 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 GDAP1L1Q96MZ0 367 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 PPFIA4O75335 1185 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 DDX42Q86XP3 938 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-201ENST00000322507 TSC1Q92574 1164 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 TMX1Q9H3N1 280 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 KIAA2013Q8IYS2 634 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 NUP58Q9BVL2 599 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-201ENST00000322507 JRKLQ9Y4A0 524 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 ELP1O95163 1332 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 PLCD1P51178 756 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
COL12A1-201ENST00000322507 RRAGBQ5VZM2 374 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 MMRN2Q9H8L6 949 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 IMPACTQ9P2X3 320 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 PHF8Q9UPP1 1060 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 CD2APQ9Y5K6 639 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 DKC1O60832 514 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL12A1-201ENST00000322507 APOEP02649 317 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 WDR75Q8IWA0 830 aaKnown RBP10.78□□□□□ -0.68
COL12A1-201ENST00000322507 OGFOD1Q8N543 542 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 KRT2P35908 639 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 MCTP2Q6DN12 878 aa10.78□□□□□ -0.68
COL12A1-201ENST00000322507 HNRNPCP07910 306 aaKnown RBP eCLIP10.77□□□□□ -0.68
COL12A1-201ENST00000322507 SLC8A3P57103 927 aa10.77□□□□□ -0.68
COL12A1-201ENST00000322507 ZNF513Q8N8E2 541 aaPredicted RBP10.77□□□□□ -0.68
COL12A1-201ENST00000322507 KIFC3Q9BVG8 833 aa10.77□□□□□ -0.68
COL12A1-201ENST00000322507 GRM8O00222 908 aa10.77□□□□□ -0.68
COL12A1-201ENST00000322507 ERO1AQ96HE7 468 aa10.77□□□□□ -0.68
COL12A1-201ENST00000322507 ABCC1P33527 1531 aa10.77□□□□□ -0.68
COL12A1-201ENST00000322507 SSFA2P28290 1259 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 TTC1Q99614 292 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 ALG1Q9BT22 464 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 S100BP04271 92 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-201ENST00000322507 INAQ16352 499 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 RILPL1Q5EBL4 403 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 KRT79Q5XKE5 535 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 C10orf88Q9H8K7 445 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 KDM1AO60341 852 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 C14orf93Q9H972 538 aaKnown RBP10.77□□□□□ -0.69
COL12A1-201ENST00000322507 ANO6Q4KMQ2 910 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD13DQ6ZTN6 518 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 UBE3BQ7Z3V4 1068 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 SPTLC2O15270 562 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 RUFY4Q6ZNE9 571 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 ST13P4Q8IZP2 240 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-201ENST00000322507 IQCA1LA6NCM1 817 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 TXNDC9O14530 226 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 HAUS3Q68CZ6 603 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 LZTS2Q9BRK4 669 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD2Q9GZV1 360 aa10.77□□□□□ -0.69
COL12A1-201ENST00000322507 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 RWDD3Q9Y3V2 267 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 EEF1DP29692 281 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 UBL4BQ8N7F7 174 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 MSH6P52701 1360 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 FBXO41Q8TF61 875 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 CCT2P78371 535 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 TRMT1Q9NXH9 659 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 F13A1P00488 732 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ST13P50502 369 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 PARVBQ9HBI1 364 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 STK10O94804 968 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 TMED10P49755 219 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 MRPS9P82933 396 aaKnown RBP10.76□□□□□ -0.69
COL12A1-201ENST00000322507 CNNM4Q6P4Q7 775 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD44Q8N8A2 993 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 CCHCR1Q8TD31 782 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD20A4Q4UJ75 823 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD20A8PQ5CZ79 823 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD20A2Q5SQ80 823 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ANKRD20A1Q5TYW2 823 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 GSTA5Q7RTV2 222 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 STX8Q9UNK0 236 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 PHACTR2O75167 634 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 SMC5Q8IY18 1101 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 HOOK2Q96ED9 719 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 COQ7Q99807 217 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 FLT4P35916 1363 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 I3L4J1 428 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 SDCCAG3Q96C92 435 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 ESYT1Q9BSJ8 1104 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 CAPN7Q9Y6W3 813 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 NOS1P29475 1434 aa10.76□□□□□ -0.69
COL12A1-201ENST00000322507 SKIP12755 728 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 SEL1L2Q5TEA6 688 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms