RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 PLCD1P51178 756 aa36.84■■■■□ 3.49
NECTIN3-201ENST00000319792 SGMS1Q86VZ5 419 aa36.84■■■■□ 3.49
NECTIN3-201ENST00000319792 LY9Q9HBG7 655 aa36.84■■■■□ 3.49
NECTIN3-201ENST00000319792 ZBTB12Q9Y330 459 aaPredicted RBP36.84■■■■□ 3.49
NECTIN3-201ENST00000319792 FZD9O00144 591 aa36.83■■■■□ 3.49
NECTIN3-201ENST00000319792 PDIA3P30101 505 aaKnown RBP36.83■■■■□ 3.49
NECTIN3-201ENST00000319792 SART3Q15020 963 aaKnown RBP36.83■■■■□ 3.49
NECTIN3-201ENST00000319792 TMEM67Q5HYA8 995 aa36.83■■■■□ 3.49
NECTIN3-201ENST00000319792 BRPF3Q9ULD4 1205 aa36.83■■■■□ 3.49
NECTIN3-201ENST00000319792 MMP14P50281 582 aa36.82■■■■□ 3.48
NECTIN3-201ENST00000319792 PICALMQ13492 652 aa36.82■■■■□ 3.48
NECTIN3-201ENST00000319792 OSBPL5Q9H0X9 879 aaPredicted RBP36.82■■■■□ 3.48
NECTIN3-201ENST00000319792 IFIT3O14879 490 aaKnown RBP36.81■■■■□ 3.48
NECTIN3-201ENST00000319792 PRDM1O75626 825 aa36.81■■■■□ 3.48
NECTIN3-201ENST00000319792 STK3Q13188 491 aa36.81■■■■□ 3.48
NECTIN3-201ENST00000319792 OGFOD1Q8N543 542 aa36.81■■■■□ 3.48
NECTIN3-201ENST00000319792 MTMR14Q8NCE2 650 aa36.81■■■■□ 3.48
NECTIN3-201ENST00000319792 KLF18A0A0U1RQI7 1052 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 SLC4A8Q2Y0W8 1093 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 C16orf86Q6ZW13 317 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 DYNLL2Q96FJ2 89 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 SMC3Q9UQE7 1217 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 MYH8P13535 1937 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 SPDYE2BA6NHP3 402 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 RANBP6O60518 1105 aaKnown RBP36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 SPDYE6P0CI01 402 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 RPS12P25398 132 aaKnown RBP36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 SCRN1Q12765 414 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 NFIAQ12857 509 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 CHMP4CQ96CF2 233 aa36.8■■■■□ 3.48
NECTIN3-201ENST00000319792 GOLGB1Q14789 3259 aaKnown RBP36.79■■■■□ 3.48
NECTIN3-201ENST00000319792 TTC6Q86TZ1 520 aa36.79■■■■□ 3.48
NECTIN3-201ENST00000319792 PRMT6Q96LA8 375 aaPredicted RBP36.79■■■■□ 3.48
NECTIN3-201ENST00000319792 UBAC1Q9BSL1 405 aa36.79■■■■□ 3.48
NECTIN3-201ENST00000319792 ZNF287Q9HBT7 754 aa36.79■■■■□ 3.48
NECTIN3-201ENST00000319792 SIPA1L1O43166 1804 aa36.78■■■■□ 3.48
NECTIN3-201ENST00000319792 NUCB2P80303 420 aa36.78■■■■□ 3.48
NECTIN3-201ENST00000319792 SEC23AQ15436 765 aa36.78■■■■□ 3.48
NECTIN3-201ENST00000319792 HPS5Q9UPZ3 1129 aa36.78■■■■□ 3.48
NECTIN3-201ENST00000319792 COL2A1P02458 1487 aaPredicted RBP36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 ERICH2A1L162 156 aa36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 EIF6P56537 245 aaKnown RBP36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 RAB3GAP1Q15042 981 aa36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 ARHGAP27Q6ZUM4 889 aa36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 TMTC2Q8N394 836 aa36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 LLPHQ9BRT6 129 aaKnown RBP36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 SENP2Q9HC62 589 aa36.77■■■■□ 3.48
NECTIN3-201ENST00000319792 WTAPQ15007 396 aa36.76■■■■□ 3.48
NECTIN3-201ENST00000319792 DLGAP5Q15398 846 aa36.76■■■■□ 3.48
NECTIN3-201ENST00000319792 IQCA1Q86XH1 822 aa36.76■■■■□ 3.48
NECTIN3-201ENST00000319792 ZSCAN10Q96SZ4 725 aaPredicted RBP36.76■■■■□ 3.48
NECTIN3-201ENST00000319792 FAM198AQ9UFP1 575 aa36.76■■■■□ 3.48
NECTIN3-201ENST00000319792 TNKSO95271 1327 aa36.76■■■■□ 3.47
NECTIN3-201ENST00000319792 GOLGA8BA8MQT2 603 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 APOA5Q6Q788 366 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 ZKSCAN3Q9BRR0 538 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 TDRD3Q9H7E2 651 aaKnown RBP36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 NID2Q14112 1375 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 LMNB1P20700 586 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 CDK8P49336 464 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 GABPAQ06546 454 aa36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 ZBED3Q96IU2 234 aaPredicted RBP36.75■■■■□ 3.47
NECTIN3-201ENST00000319792 SLC44A5Q8NCS7 719 aa36.74■■■■□ 3.47
NECTIN3-201ENST00000319792 MKNK2Q9HBH9 465 aa36.74■■■■□ 3.47
NECTIN3-201ENST00000319792 NAP1L2Q9ULW6 460 aaPredicted RBP36.74■■■■□ 3.47
NECTIN3-201ENST00000319792 ENTPD3O75355 529 aa36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 RASA1P20936 1047 aa36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 GJB2P29033 226 aa36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 ZNF280AP59817 542 aaPredicted RBP36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 ENAHQ8N8S7 591 aaPredicted RBP36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 DHX36Q9H2U1 1008 aaKnown RBP36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 TAOK2Q9UL54 1235 aa36.73■■■■□ 3.47
NECTIN3-201ENST00000319792 RCAN1P53805 252 aa36.72■■■■□ 3.47
NECTIN3-201ENST00000319792 CACNB3P54284 484 aa36.72■■■■□ 3.47
NECTIN3-201ENST00000319792 NFXL1Q6ZNB6 911 aa36.72■■■■□ 3.47
NECTIN3-201ENST00000319792 DPF2Q92785 391 aa36.72■■■■□ 3.47
NECTIN3-201ENST00000319792 EHD4Q9H223 541 aa36.72■■■■□ 3.47
NECTIN3-201ENST00000319792 CCDC69A6NI79 296 aa36.71■■■■□ 3.47
NECTIN3-201ENST00000319792 TSPY2A6NKD2 308 aa36.71■■■■□ 3.47
NECTIN3-201ENST00000319792 CCT2P78371 535 aaKnown RBP36.71■■■■□ 3.47
NECTIN3-201ENST00000319792 FAM47AQ5JRC9 791 aa36.71■■■■□ 3.47
NECTIN3-201ENST00000319792 SMARCC2Q8TAQ2 1214 aa36.71■■■■□ 3.47
NECTIN3-201ENST00000319792 ATRNL1Q5VV63 1379 aa36.71■■■■□ 3.47
NECTIN3-201ENST00000319792 HLA-DOAP06340 250 aa36.7■■■■□ 3.47
NECTIN3-201ENST00000319792 SPDYE2Q495Y8 402 aa36.7■■■■□ 3.47
NECTIN3-201ENST00000319792 ZFPM1Q8IX07 1006 aa36.7■■■■□ 3.47
NECTIN3-201ENST00000319792 TMOD2Q9NZR1 351 aa36.7■■■■□ 3.47
NECTIN3-201ENST00000319792 SLC12A7Q9Y666 1083 aa36.7■■■■□ 3.47
NECTIN3-201ENST00000319792 ZBTB43O43298 467 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 TFAP4Q01664 338 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 PKP1Q13835 747 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 ZNF444Q8N0Y2 327 aaPredicted RBP36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 NSUN7Q8NE18 718 aaKnown RBP36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 NCOA5Q9HCD5 579 aaKnown RBP36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 TCP11L1Q9NUJ3 509 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 SWAP70Q9UH65 585 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 SERPINB13Q9UIV8 391 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 ZNF541Q9H0D2 1346 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 CTDNEP1O95476 244 aa36.69■■■■□ 3.46
NECTIN3-201ENST00000319792 ZNF70Q9UC06 446 aaPredicted RBP36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms