RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 HELLSQ9NRZ9 838 aa11□□□□□ -0.65
RPGR-201ENST00000318842 FAM217BQ9NTX9 383 aaPredicted RBP11□□□□□ -0.65
RPGR-201ENST00000318842 SMARCAL1Q9NZC9 954 aa11□□□□□ -0.65
RPGR-201ENST00000318842 EYA2O00167 538 aa11□□□□□ -0.65
RPGR-201ENST00000318842 SART3Q15020 963 aaKnown RBP11□□□□□ -0.65
RPGR-201ENST00000318842 AMOTQ4VCS5 1084 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CCDC102BQ68D86 513 aa11□□□□□ -0.65
RPGR-201ENST00000318842 NCOA7Q8NI08 942 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
RPGR-201ENST00000318842 NCAPD2Q15021 1401 aa11□□□□□ -0.65
RPGR-201ENST00000318842 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
RPGR-201ENST00000318842 PCNTO95613 3336 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CHD2O14647 1828 aaKnown RBP11□□□□□ -0.65
RPGR-201ENST00000318842 KDM3BQ7LBC6 1761 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CYP2D7A0A087X1C5 515 aa11□□□□□ -0.65
RPGR-201ENST00000318842 LRRIQ3A6PVS8 624 aaPredicted RBP11□□□□□ -0.65
RPGR-201ENST00000318842 NKRFO15226 690 aaKnown RBP eCLIP11□□□□□ -0.65
RPGR-201ENST00000318842 NRDCO43847 1150 aa11□□□□□ -0.65
RPGR-201ENST00000318842 SNRPA1P09661 255 aaKnown RBP11□□□□□ -0.65
RPGR-201ENST00000318842 VEGFAP15692 232 aaPredicted RBP11□□□□□ -0.65
RPGR-201ENST00000318842 E2F4Q16254 413 aa11□□□□□ -0.65
RPGR-201ENST00000318842 RABL6Q3YEC7 729 aaPredicted RBP11□□□□□ -0.65
RPGR-201ENST00000318842 TMEM67Q5HYA8 995 aa11□□□□□ -0.65
RPGR-201ENST00000318842 CCDC158Q5M9N0 1113 aa11□□□□□ -0.65
RPGR-201ENST00000318842 SPECC1LQ69YQ0 1117 aa11□□□□□ -0.65
RPGR-201ENST00000318842 DIS3L2Q8IYB7 885 aaKnown RBP11□□□□□ -0.65
RPGR-201ENST00000318842 CSRNP2Q9H175 543 aa11□□□□□ -0.65
RPGR-201ENST00000318842 RAI14Q9P0K7 980 aa11□□□□□ -0.65
RPGR-201ENST00000318842 UTRNP46939 3433 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 UBR1Q8IWV7 1749 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 POSTNQ15063 836 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 TAF3Q5VWG9 929 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 RSRC2Q7L4I2 434 aaKnown RBP10.99□□□□□ -0.65
RPGR-201ENST00000318842 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 IGSF22Q8N9C0 903 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 C19orf44Q9H6X5 657 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 ARMT1Q9H993 441 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 TUBE1Q9UJT0 475 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 HPSEQ9Y251 543 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 TBX22Q9Y458 520 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 ANKARQ7Z5J8 1434 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 C5P01031 1676 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 ARHGAP6O43182 974 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
RPGR-201ENST00000318842 PHKA1P46020 1223 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 DRC1Q96MC2 740 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 CHP1Q99653 195 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 TAB2Q9NYJ8 693 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 GUCA1BQ9UMX6 200 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 AKAP2Q9Y2D5 859 aa10.99□□□□□ -0.65
RPGR-201ENST00000318842 RRP15Q9Y3B9 282 aaKnown RBP10.99□□□□□ -0.65
RPGR-201ENST00000318842 KIF2AO00139 706 aaPredicted RBP10.98□□□□□ -0.65
RPGR-201ENST00000318842 ZNF185O15231 689 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
RPGR-201ENST00000318842 DNA2P51530 1060 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 RESP18Q5W5W9 173 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 ZSWIM5Q9P217 1185 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
RPGR-201ENST00000318842 ZPR1O75312 459 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 TRDNQ13061 729 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 TOM1L2Q6ZVM7 507 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 CWC25Q9NXE8 425 aaPredicted RBP10.98□□□□□ -0.65
RPGR-201ENST00000318842 ZBTB43O43298 467 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 CUTAO60888 179 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 PPARAQ07869 468 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 ZNF174Q15697 407 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 CCDC57Q2TAC2 916 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
RPGR-201ENST00000318842 CTNND2Q9UQB3 1225 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 DUSP10Q9Y6W6 482 aa10.98□□□□□ -0.65
RPGR-201ENST00000318842 N4BP2Q86UW6 1770 aaPredicted RBP10.97□□□□□ -0.65
RPGR-201ENST00000318842 MED1Q15648 1581 aaPredicted RBP10.97□□□□□ -0.65
RPGR-201ENST00000318842 TRIM49BA6NDI0 452 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 IKBKBO14920 756 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 ZSCAN12O43309 604 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 MYBL2P10244 700 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 TXLNAP40222 546 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 ERVK-24P63145 666 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
RPGR-201ENST00000318842 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 GREM2Q9H772 168 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 EHD2Q9NZN4 543 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 ADGRG1Q9Y653 693 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 MEGF6O75095 1541 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 MYH15Q9Y2K3 1946 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 MATR3P43243 847 aaKnown RBP eCLIP10.97□□□□□ -0.65
RPGR-201ENST00000318842 TBX2Q13207 712 aaPredicted RBP10.97□□□□□ -0.65
RPGR-201ENST00000318842 BEND6Q5SZJ8 279 aaPredicted RBP10.97□□□□□ -0.65
RPGR-201ENST00000318842 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
RPGR-201ENST00000318842 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
RPGR-201ENST00000318842 NWD2Q9ULI1 1742 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 KLK7P49862 253 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 SF3A3Q12874 501 aaKnown RBP eCLIP10.96□□□□□ -0.65
RPGR-201ENST00000318842 NTRK3Q16288 839 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 JAKMIP3Q5VZ66 844 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
RPGR-201ENST00000318842 BRAPQ7Z569 592 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms