RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ATP6V1AP38606 617 aa20.53■□□□□ 0.88
SPSB4-201ENST00000310546 AKAP17AQ02040 695 aaKnown RBP20.53■□□□□ 0.88
SPSB4-201ENST00000310546 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
SPSB4-201ENST00000310546 NFE2L3Q9Y4A8 694 aa20.53■□□□□ 0.88
SPSB4-201ENST00000310546 TRMT44Q8IYL2 757 aaKnown RBP20.53■□□□□ 0.88
SPSB4-201ENST00000310546 XAGE3Q8WTP9 111 aa20.53■□□□□ 0.88
SPSB4-201ENST00000310546 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
SPSB4-201ENST00000310546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.53■□□□□ 0.88
SPSB4-201ENST00000310546 PCDHA5Q9Y5H7 936 aa20.53■□□□□ 0.88
SPSB4-201ENST00000310546 SYF2O95926 243 aaKnown RBP20.52■□□□□ 0.88
SPSB4-201ENST00000310546 A1BGP04217 495 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 HNRNPH1P31943 449 aaKnown RBP20.52■□□□□ 0.88
SPSB4-201ENST00000310546 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 IGSF22Q8N9C0 903 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 CDC5LQ99459 802 aaKnown RBP20.52■□□□□ 0.88
SPSB4-201ENST00000310546 ADGRG1Q9Y653 693 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 ZNF609O15014 1411 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 KIF28PB7ZC32 967 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 RAD9BQ6WBX8 426 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 FOXP4Q8IVH2 680 aaPredicted RBP20.52■□□□□ 0.88
SPSB4-201ENST00000310546 SLC35F6Q8N357 371 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 SUFUQ9UMX1 484 aa20.52■□□□□ 0.88
SPSB4-201ENST00000310546 EXOSC10Q01780 885 aaKnown RBP20.51■□□□□ 0.87
SPSB4-201ENST00000310546 PDIA6Q15084 440 aa20.51■□□□□ 0.87
SPSB4-201ENST00000310546 FAM107BQ9H098 131 aa20.51■□□□□ 0.87
SPSB4-201ENST00000310546 BMP6P22004 513 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 KAZALD1Q96I82 304 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 DONSONQ9NYP3 566 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 FAM169AQ9Y6X4 670 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 AKR1B15C9JRZ8 316 aaPredicted RBP20.5■□□□□ 0.87
SPSB4-201ENST00000310546 EBAG9O00559 213 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 LONRF3Q496Y0 759 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 METTL16Q86W50 562 aaKnown RBP20.5■□□□□ 0.87
SPSB4-201ENST00000310546 FOXN1O15353 648 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 NCAPH2Q6IBW4 605 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 SHC4Q6S5L8 630 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 RAI14Q9P0K7 980 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
SPSB4-201ENST00000310546 E7EWF7 191 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 ABL1P00519 1130 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
SPSB4-201ENST00000310546 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 DBNLQ9UJU6 430 aaKnown RBP20.49■□□□□ 0.87
SPSB4-201ENST00000310546 GRM8O00222 908 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 FMR1Q06787 632 aaKnown RBP eCLIP20.49■□□□□ 0.87
SPSB4-201ENST00000310546 ZNF827Q17R98 1081 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 BRAPQ7Z569 592 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 FAM212AQ96EL1 285 aa20.49■□□□□ 0.87
SPSB4-201ENST00000310546 KCNV1Q6PIU1 500 aa20.48■□□□□ 0.87
SPSB4-201ENST00000310546 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
SPSB4-201ENST00000310546 SAMSN1Q9NSI8 373 aaKnown RBP20.48■□□□□ 0.87
SPSB4-201ENST00000310546 C5P01031 1676 aa20.48■□□□□ 0.87
SPSB4-201ENST00000310546 COL5A2P05997 1499 aaPredicted RBP20.48■□□□□ 0.87
SPSB4-201ENST00000310546 PRPF6O94906 941 aaKnown RBP20.48■□□□□ 0.87
SPSB4-201ENST00000310546 SLC39A14Q15043 492 aa20.48■□□□□ 0.87
SPSB4-201ENST00000310546 ACSBG1Q96GR2 724 aa20.48■□□□□ 0.87
SPSB4-201ENST00000310546 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 CPLX1O14810 134 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 MYO1BO43795 1136 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 TUBB4BP68371 445 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 CCDC102BQ68D86 513 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 MYD88Q99836 296 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 EHD4Q9H223 541 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 KAT14Q9H8E8 782 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 SPECC1Q5M775 1068 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 PPFIBP1Q86W92 1011 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 NAPGQ99747 312 aaPredicted RBP20.47■□□□□ 0.87
SPSB4-201ENST00000310546 AGXT2Q9BYV1 514 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 RBL2Q08999 1139 aa20.47■□□□□ 0.87
SPSB4-201ENST00000310546 JPH2Q9BR39 696 aaPredicted RBP20.47■□□□□ 0.87
SPSB4-201ENST00000310546 TEX33O43247 280 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 SNRPA1P09661 255 aaKnown RBP20.46■□□□□ 0.87
SPSB4-201ENST00000310546 GGCXP38435 758 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 USP8P40818 1118 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 ACRBPQ8NEB7 543 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 CCDC148Q8NFR7 591 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
SPSB4-201ENST00000310546 ZMYND10O75800 440 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 ATP5JP18859 108 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 BCAS4Q8TDM0 211 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 ZBTB3Q9H5J0 574 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 DDX21Q9NR30 783 aaKnown RBP eCLIP20.46■□□□□ 0.87
SPSB4-201ENST00000310546 HOOK1Q9UJC3 728 aaKnown RBP20.46■□□□□ 0.87
SPSB4-201ENST00000310546 CDHR2Q9BYE9 1310 aa20.46■□□□□ 0.87
SPSB4-201ENST00000310546 KIF23Q02241 960 aaPredicted RBP20.45■□□□□ 0.86
SPSB4-201ENST00000310546 HPCAL4Q9UM19 191 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 HPSEQ9Y251 543 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 CCDC196A0A1B0GTZ2 297 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 INPP5BP32019 993 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 TUBB2AQ13885 445 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 WHAMMP3Q1A5X7 153 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.45■□□□□ 0.86
SPSB4-201ENST00000310546 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
SPSB4-201ENST00000310546 TUBB2BQ9BVA1 445 aa20.45■□□□□ 0.86
SPSB4-201ENST00000310546 PCDH11XQ9BZA7 1347 aa20.44■□□□□ 0.86
SPSB4-201ENST00000310546 PCDH11YQ9BZA8 1340 aa20.44■□□□□ 0.86
SPSB4-201ENST00000310546 TUBBP07437 444 aa20.44■□□□□ 0.86
SPSB4-201ENST00000310546 AARSP49588 968 aaKnown RBP eCLIP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms