RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 H3BQV1 296 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 ZBTB43O43298 467 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 ORC4O43929 436 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 ANTXR2P58335 489 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 C12orf60Q5U649 245 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 TTC6Q86TZ1 520 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
CTDSPL-202ENST00000310189 BAZ2AQ9UIF9 1905 aaKnown RBP13.33□□□□□ -0.27
CTDSPL-202ENST00000310189 SRCAPQ6ZRS2 3230 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 TSPY2A6NKD2 308 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 BRD1O95696 1058 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 SYT1P21579 422 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 CRKP46108 304 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 SCNN1DP51172 638 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 SCRN1Q12765 414 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 PPP2R5BQ15173 497 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 DACT2Q5SW24 774 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 SGMS1Q86VZ5 419 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
CTDSPL-202ENST00000310189 LAMB1P07942 1786 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 FGRP09769 529 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CALM1P0DP23 149 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CALM2P0DP24 149 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CALM3P0DP25 149 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 LMNB1P20700 586 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 RCAN1P53805 252 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CSPP1Q1MSJ5 1256 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 IFIT1BQ5T764 474 aaKnown RBP13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 IGDCC4Q8TDY8 1250 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 ZSCAN10Q96SZ4 725 aaPredicted RBP13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 SERPINA10Q9UK55 444 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 ZNRF3Q9ULT6 936 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
CTDSPL-202ENST00000310189 YDJCA8MPS7 323 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 COL9A3Q14050 684 aaPredicted RBP13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 TNIP1Q15025 636 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 FOXD4L5Q5VV16 416 aaPredicted RBP13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 FOXD4L4Q8WXT5 416 aaPredicted RBP13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 SAP30BPQ9UHR5 308 aaKnown RBP13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 COL4A5P29400 1685 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 FLT1P17948 1338 aa13.31□□□□□ -0.28
CTDSPL-202ENST00000310189 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 TSPY3P0CV98 308 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 TSPY8P0CW00 308 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 MMP14P50281 582 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 PRELPP51888 382 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 RHBDL3P58872 404 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 PICALMQ13492 652 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 MICU3Q86XE3 530 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 WASF1Q92558 559 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 MXD3Q9BW11 206 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 TRIM34Q9BYJ4 488 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 KCNQ5Q9NR82 932 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 BRPF3Q9ULD4 1205 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 TNKSO95271 1327 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 ROBO3Q96MS0 1386 aa13.3□□□□□ -0.28
CTDSPL-202ENST00000310189 PRDM1O75626 825 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 RAD17O75943 681 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 CYP2D6P10635 497 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 EIF6P56537 245 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 NSUN7Q8NE18 718 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 SMARCC2Q8TAQ2 1214 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 RNF181Q9P0P0 153 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 SWAP70Q9UH65 585 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 TAOK2Q9UL54 1235 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 F13A1P00488 732 aa13.29□□□□□ -0.28
CTDSPL-202ENST00000310189 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms