RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 KCNH3Q9ULD8 1083 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 ZNF804BA4D1E1 1349 aa17.54■□□□□ 0.4
SPIRE1-201ENST00000309836 SMIM22K7EJ46 135 aa17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 SART3Q15020 963 aaKnown RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 KRI1Q8N9T8 703 aaKnown RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 CCDC150Q8NCX0 1101 aa17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 TRMT1Q9NXH9 659 aaKnown RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 FBXO2Q9UK22 296 aaPredicted RBP17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
SPIRE1-201ENST00000309836 WTIPA6NIX2 430 aaPredicted RBP17.52■□□□□ 0.4
SPIRE1-201ENST00000309836 GRIN1Q05586 938 aa17.52■□□□□ 0.4
SPIRE1-201ENST00000309836 TRIM22Q8IYM9 498 aa17.52■□□□□ 0.4
SPIRE1-201ENST00000309836 COL5A3P25940 1745 aaPredicted RBP17.52■□□□□ 0.4
SPIRE1-201ENST00000309836 CACNA1SQ13698 1873 aa17.52■□□□□ 0.4
SPIRE1-201ENST00000309836 FOXN1O15353 648 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 DEXIO95424 95 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 GYG1P46976 350 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 RCAN1P53805 252 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SAFBQ15424 915 aaKnown RBP eCLIP17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SYCP1Q15431 976 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SEC23AQ15436 765 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SPECC1Q5M775 1068 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SDR42E1Q8WUS8 393 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 ZNF592Q92610 1267 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 DPF2Q92785 391 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SHISA4Q96DD7 197 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 FOXP1Q9H334 677 aaPredicted RBP17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 RNF41Q9H4P4 317 aaPredicted RBP17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 ANAPC4Q9UJX5 808 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 SCN7AQ01118 1682 aa17.52■□□□□ 0.39
SPIRE1-201ENST00000309836 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 MAGEB6P1A0A0J9YX57 407 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 MYL5Q02045 173 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 PTPN14Q15678 1187 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 PDCL2Q8N4E4 241 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 CCDC82Q8N4S0 544 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 THRAP3Q9Y2W1 955 aaKnown RBP17.51■□□□□ 0.39
SPIRE1-201ENST00000309836 ERICH2A1L162 156 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 BMP6P22004 513 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 PTPREP23469 700 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 PDE4BQ07343 736 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 NR5A1Q13285 461 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 E4F1Q66K89 784 aaPredicted RBP17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 TMTC2Q8N394 836 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 CNNM3Q8NE01 707 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 OXER1Q8TDS5 423 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 CDC5LQ99459 802 aaKnown RBP17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 RIOK1Q9BRS2 568 aaKnown RBP17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 PCDHA5Q9Y5H7 936 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 TAF1P21675 1872 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 NAA30Q147X3 362 aaPredicted RBP17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 PPP4R3BQ5MIZ7 849 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
SPIRE1-201ENST00000309836 TNKSO95271 1327 aa17.49■□□□□ 0.39
SPIRE1-201ENST00000309836 CCDC196A0A1B0GTZ2 297 aa17.49■□□□□ 0.39
SPIRE1-201ENST00000309836 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
SPIRE1-201ENST00000309836 UBAC1Q9BSL1 405 aa17.49■□□□□ 0.39
SPIRE1-201ENST00000309836 ABCF2Q9UG63 623 aa17.49■□□□□ 0.39
SPIRE1-201ENST00000309836 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 SFPQP23246 707 aaKnown RBP eCLIP17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 ZNF384Q8TF68 577 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 DLEC1Q9Y238 1755 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 CYP2D7A0A087X1C5 515 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 KCNJ6P48051 423 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 FUT2Q10981 343 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 ESR2Q92731 530 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 PPP1R13BQ96KQ4 1090 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 MYH6P13533 1939 aa17.48■□□□□ 0.39
SPIRE1-201ENST00000309836 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 FAM205CA6NFA0 338 aa17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 SF3B3Q15393 1217 aaKnown RBP17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 ENAHQ8N8S7 591 aaPredicted RBP17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 GNL3LQ9NVN8 582 aaKnown RBP17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 SERTAD1Q9UHV2 236 aa17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 ZNF652Q9Y2D9 606 aa17.47■□□□□ 0.39
SPIRE1-201ENST00000309836 BAZ2AQ9UIF9 1905 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms