RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 SATB2Q9UPW6 733 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
LEMD3-201ENST00000308330 SLMAPQ14BN4 828 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.13■□□□□ 0.337e-6■■□□□ 12.8
LEMD3-201ENST00000308330 SEC31AO94979 1220 aaKnown RBP17.13■□□□□ 0.33
LEMD3-201ENST00000308330 RFC1P35251 1148 aaPredicted RBP17.13■□□□□ 0.33
LEMD3-201ENST00000308330 PSEN1P49768 467 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 PSMD7P51665 324 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
LEMD3-201ENST00000308330 LARGE2Q8N3Y3 721 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 OSBPL9Q96SU4 736 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
LEMD3-201ENST00000308330 GUCY1B3Q02153 619 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 MIGA1Q8NAN2 632 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 USP19O94966 1318 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 ERBB3P21860 1342 aa17.13■□□□□ 0.33
LEMD3-201ENST00000308330 ZFXP17010 805 aaPredicted RBP17.12■□□□□ 0.33
LEMD3-201ENST00000308330 SDSP20132 328 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 NLRP5P59047 1200 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 C6orf163Q5TEZ5 329 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 PAG1Q9NWQ8 432 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 ARHGAP31Q2M1Z3 1444 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 C8orf76Q96K31 380 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 BAG1Q99933 345 aaPredicted RBP17.12■□□□□ 0.33
LEMD3-201ENST00000308330 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
LEMD3-201ENST00000308330 MYLK4Q86YV6 388 aaPredicted RBP17.12■□□□□ 0.33
LEMD3-201ENST00000308330 CUL5Q93034 780 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 ZNF594Q96JF6 807 aaPredicted RBP17.12■□□□□ 0.33
LEMD3-201ENST00000308330 FAM204AQ9H8W3 233 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 KCNQ4P56696 695 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 CUL3Q13618 768 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 BATF3Q9NR55 127 aa17.12■□□□□ 0.33
LEMD3-201ENST00000308330 CTAGE9A4FU28 777 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 SYT1P21579 422 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 PPP1R7Q15435 360 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 STIM1Q13586 685 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 PDLIM2Q96JY6 352 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 NEK1Q96PY6 1258 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 SH3BP1Q9Y3L3 701 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 CAPS2Q9BXY5 557 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 USP6P35125 1406 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 TNIP1Q15025 636 aa17.11■□□□□ 0.33
LEMD3-201ENST00000308330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.11■□□□□ 0.33
LEMD3-201ENST00000308330 NAP1L3Q99457 506 aaPredicted RBP17.11■□□□□ 0.33
LEMD3-201ENST00000308330 TSPY3P0CV98 308 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 TSPY8P0CW00 308 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 GCKRQ14397 625 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 ITFG2Q969R8 447 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 KIF9Q9HAQ2 790 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 MCM9Q9NXL9 1143 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 STIM2Q9P246 746 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 FAN1Q9Y2M0 1017 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
LEMD3-201ENST00000308330 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 SAMD15Q9P1V8 674 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 BCS1LQ9Y276 419 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 LIMCH1Q9UPQ0 1083 aa17.1■□□□□ 0.33
LEMD3-201ENST00000308330 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 PLCG2P16885 1265 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 HLTFQ14527 1009 aaKnown RBP eCLIP17.09■□□□□ 0.33
LEMD3-201ENST00000308330 MCMDC2Q4G0Z9 681 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
LEMD3-201ENST00000308330 ZBTB40Q9NUA8 1239 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 FAM135BQ49AJ0 1406 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
LEMD3-201ENST00000308330 ZNF75DP51815 510 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 GPR162Q16538 588 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 ESR2Q92731 530 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 ST7Q9NRC1 585 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 UBAP1Q9NZ09 502 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 MAGEB6P1A0A0J9YX57 407 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 HIP1RO75146 1068 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 TAF5LO75529 589 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 TMED1Q13445 227 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 RNF10Q8N5U6 811 aaKnown RBP17.09■□□□□ 0.33
LEMD3-201ENST00000308330 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 FAM169AQ9Y6X4 670 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 GCOM1H8Y6P7 765 aaPredicted RBP17.09■□□□□ 0.33
LEMD3-201ENST00000308330 MYZAPP0CAP1 466 aa17.09■□□□□ 0.33
LEMD3-201ENST00000308330 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
LEMD3-201ENST00000308330 RASEFQ8IZ41 740 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms