RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 WDR66Q8TBY9 1149 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 MRPS27Q92552 414 aaKnown RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 NOL7Q9UMY1 257 aaKnown RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 JAG2Q9Y219 1238 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 SPTLC2O15270 562 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 KINO60870 393 aaKnown RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 TRIM37O94972 964 aa23.37■■□□□ 1.33
SSH3-202ENST00000308298 MSNP26038 577 aaKnown RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 C15orf52Q6ZUT6 534 aaKnown RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 TDRD7Q8NHU6 1098 aaKnown RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 DCP1AQ9NPI6 582 aaPredicted RBP23.37■■□□□ 1.33
SSH3-202ENST00000308298 ADCY5O95622 1261 aa23.36■■□□□ 1.33
SSH3-202ENST00000308298 GNL2Q13823 731 aaKnown RBP23.36■■□□□ 1.33
SSH3-202ENST00000308298 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
SSH3-202ENST00000308298 FANCBQ8NB91 859 aa23.36■■□□□ 1.33
SSH3-202ENST00000308298 ZSCAN10Q96SZ4 725 aaPredicted RBP23.36■■□□□ 1.33
SSH3-202ENST00000308298 U2AF2P26368 475 aaKnown RBP eCLIP23.35■■□□□ 1.33
SSH3-202ENST00000308298 ANO6Q4KMQ2 910 aa23.35■■□□□ 1.33
SSH3-202ENST00000308298 ENAHQ8N8S7 591 aaPredicted RBP23.35■■□□□ 1.33
SSH3-202ENST00000308298 NUP133Q8WUM0 1156 aa23.35■■□□□ 1.33
SSH3-202ENST00000308298 PPP2R5BQ15173 497 aa23.35■■□□□ 1.33
SSH3-202ENST00000308298 NBPF11Q86T75 865 aa23.35■■□□□ 1.33
SSH3-202ENST00000308298 IQCA1Q86XH1 822 aa23.35■■□□□ 1.33
SSH3-202ENST00000308298 RBM17Q96I25 401 aaKnown RBP23.35■■□□□ 1.33
SSH3-202ENST00000308298 ARPP21Q9UBL0 812 aaPredicted RBP23.35■■□□□ 1.33
SSH3-202ENST00000308298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.35■■□□□ 1.33
SSH3-202ENST00000308298 PTMAP06454 111 aaKnown RBP23.34■■□□□ 1.33
SSH3-202ENST00000308298 LDHBP07195 334 aaKnown RBP23.34■■□□□ 1.33
SSH3-202ENST00000308298 GPSM2P81274 684 aa23.34■■□□□ 1.33
SSH3-202ENST00000308298 CRACR2BQ8N4Y2 399 aaPredicted RBP23.34■■□□□ 1.33
SSH3-202ENST00000308298 EP400Q96L91 3159 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 UBE2Q2LH0YL09 131 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 ORC4O43929 436 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 PRDM1O75626 825 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 DEXIO95424 95 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 SBK1Q52WX2 424 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 FMR1NBQ8N0W7 255 aaPredicted RBP23.33■■□□□ 1.33
SSH3-202ENST00000308298 TAOK2Q9UL54 1235 aa23.33■■□□□ 1.33
SSH3-202ENST00000308298 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.33■■□□□ 1.32
SSH3-202ENST00000308298 ZKSCAN5Q9Y2L8 839 aa23.33■■□□□ 1.32
SSH3-202ENST00000308298 SLC3A2P08195 630 aaKnown RBP23.32■■□□□ 1.32
SSH3-202ENST00000308298 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
SSH3-202ENST00000308298 GUCY1A2P33402 732 aa23.32■■□□□ 1.32
SSH3-202ENST00000308298 SLC39A14Q15043 492 aa23.32■■□□□ 1.32
SSH3-202ENST00000308298 IFIT1BQ5T764 474 aaKnown RBP23.32■■□□□ 1.32
SSH3-202ENST00000308298 CBX8Q9HC52 389 aa23.32■■□□□ 1.32
SSH3-202ENST00000308298 CAVIN2O95810 425 aa23.32■■□□□ 1.32
SSH3-202ENST00000308298 DDR1Q08345 913 aa23.32■■□□□ 1.32
SSH3-202ENST00000308298 GPR101Q96P66 508 aaPredicted RBP23.32■■□□□ 1.32
SSH3-202ENST00000308298 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.32■■□□□ 1.32
SSH3-202ENST00000308298 A0A1B0GVL5 298 aa23.31■■□□□ 1.32
SSH3-202ENST00000308298 UFL1O94874 794 aa23.31■■□□□ 1.32
SSH3-202ENST00000308298 MMP1P03956 469 aa23.31■■□□□ 1.32
SSH3-202ENST00000308298 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
SSH3-202ENST00000308298 GSTO1P78417 241 aa23.31■■□□□ 1.32
SSH3-202ENST00000308298 CATIPQ7Z7H3 387 aa23.31■■□□□ 1.32
SSH3-202ENST00000308298 LRRC37AA6NMS7 1700 aa23.31■■□□□ 1.32
SSH3-202ENST00000308298 NAV1Q8NEY1 1877 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
SSH3-202ENST00000308298 PLCB2Q00722 1185 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 SAFBQ15424 915 aaKnown RBP eCLIP23.3■■□□□ 1.32
SSH3-202ENST00000308298 TXNRD1Q16881 649 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 LUZP1Q86V48 1076 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 CCDC82Q8N4S0 544 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 RNF26Q9BY78 433 aaPredicted RBP23.3■■□□□ 1.32
SSH3-202ENST00000308298 AP5Z1O43299 807 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 BBOX1O75936 387 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 HOXA10P31260 410 aaPredicted RBP23.3■■□□□ 1.32
SSH3-202ENST00000308298 NDUFA8P51970 172 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 EVX2Q03828 476 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 AXDND1Q5T1B0 1012 aaPredicted RBP23.3■■□□□ 1.32
SSH3-202ENST00000308298 CMTR1Q8N1G2 835 aaKnown RBP23.3■■□□□ 1.32
SSH3-202ENST00000308298 DNAJC25Q9H1X3 360 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 GGA1Q9UJY5 639 aa23.3■■□□□ 1.32
SSH3-202ENST00000308298 PPP6R2O75170 966 aa23.29■■□□□ 1.32
SSH3-202ENST00000308298 CALM1P0DP23 149 aa23.29■■□□□ 1.32
SSH3-202ENST00000308298 CALM2P0DP24 149 aa23.29■■□□□ 1.32
SSH3-202ENST00000308298 CALM3P0DP25 149 aa23.29■■□□□ 1.32
SSH3-202ENST00000308298 CYP2D6P10635 497 aa23.29■■□□□ 1.32
SSH3-202ENST00000308298 ZNF165P49910 485 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 PDE4BQ07343 736 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 PTPAQ15257 358 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 STX1AQ16623 288 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 NOSTRINQ8IVI9 506 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 PROM2Q8N271 834 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 MAP3K14Q99558 947 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 RBM28Q9NW13 759 aaKnown RBP23.28■■□□□ 1.32
SSH3-202ENST00000308298 MCM9Q9NXL9 1143 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 ANKRD31Q8N7Z5 1873 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 DDAH1O94760 285 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 CMA1P23946 247 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 DIS3L2Q8IYB7 885 aaKnown RBP23.28■■□□□ 1.32
SSH3-202ENST00000308298 CRAMP1Q96RY5 1269 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 CD209Q9NNX6 404 aa23.28■■□□□ 1.32
SSH3-202ENST00000308298 CDK5RAP2Q96SN8 1893 aa23.27■■□□□ 1.32
SSH3-202ENST00000308298 BAG3O95817 575 aa23.27■■□□□ 1.32
SSH3-202ENST00000308298 USP5P45974 858 aa23.27■■□□□ 1.32
SSH3-202ENST00000308298 FOXP1Q9H334 677 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms