RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.22
RAB40A-201ENST00000304236 PYCARDQ9ULZ3 195 aa16.46■□□□□ 0.22
RAB40A-201ENST00000304236 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
RAB40A-201ENST00000304236 SDF4Q9BRK5 362 aa16.45■□□□□ 0.22
RAB40A-201ENST00000304236 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
RAB40A-201ENST00000304236 RTL9Q8NET4 1388 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 PPFIA3O75145 1194 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 GNAT2P19087 354 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 ANO1Q5XXA6 986 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 OTUD7BQ6GQQ9 843 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 C11orf57Q6ZUT1 292 aaPredicted RBP16.44■□□□□ 0.22
RAB40A-201ENST00000304236 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 NEMFO60524 1076 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
RAB40A-201ENST00000304236 LIFRP42702 1097 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
RAB40A-201ENST00000304236 CCDC152Q4G0S7 254 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
RAB40A-201ENST00000304236 ZBTB43O43298 467 aa16.43■□□□□ 0.22
RAB40A-201ENST00000304236 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
RAB40A-201ENST00000304236 ZRSR1Q15695 479 aaKnown RBP16.43■□□□□ 0.22
RAB40A-201ENST00000304236 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
RAB40A-201ENST00000304236 APOA5Q6Q788 366 aa16.43■□□□□ 0.22
RAB40A-201ENST00000304236 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
RAB40A-201ENST00000304236 C17orf53Q8N3J3 647 aaPredicted RBP16.43■□□□□ 0.22
RAB40A-201ENST00000304236 KRT23Q9C075 422 aa16.43■□□□□ 0.22
RAB40A-201ENST00000304236 NAPBQ9H115 298 aa16.43■□□□□ 0.22
RAB40A-201ENST00000304236 CMA1P23946 247 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 IGHMBP2P38935 993 aaKnown RBP16.42■□□□□ 0.22
RAB40A-201ENST00000304236 DNAJC5GQ8N7S2 189 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 C7orf43Q8WVR3 580 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 MTA3Q9BTC8 594 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 STK36Q9NRP7 1315 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 B4E1Z4 1266 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 ALDH1B1P30837 517 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 NDUFA8P51970 172 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 SLC39A14Q15043 492 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
RAB40A-201ENST00000304236 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 KIAA1468Q9P260 1216 aa16.42■□□□□ 0.22
RAB40A-201ENST00000304236 FER1L6Q2WGJ9 1857 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 RASGRF1Q13972 1273 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 TRIM29Q14134 588 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 TMEM67Q5HYA8 995 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 DHX40Q8IX18 779 aaKnown RBP16.41■□□□□ 0.22
RAB40A-201ENST00000304236 WASF1Q92558 559 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 TIGD1Q96MW7 591 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 LY9Q9HBG7 655 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 TIAM2Q8IVF5 1701 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 CCDC88AQ3V6T2 1871 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
RAB40A-201ENST00000304236 GOLGA8AA7E2F4 631 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 KIF28PB7ZC32 967 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 PPP6R2O75170 966 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 MBD4O95243 580 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
RAB40A-201ENST00000304236 KRT40Q6A162 431 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 LAMB2P55268 1798 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 NEDD4P46934 1319 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
RAB40A-201ENST00000304236 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 FAM13BQ9NYF5 915 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 SLC12A7Q9Y666 1083 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 NID2Q14112 1375 aa16.4■□□□□ 0.22
RAB40A-201ENST00000304236 CCDC69A6NI79 296 aa16.39■□□□□ 0.21
RAB40A-201ENST00000304236 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
RAB40A-201ENST00000304236 ZNF202O95125 648 aa16.39■□□□□ 0.21
RAB40A-201ENST00000304236 SLC3A2P08195 630 aaKnown RBP16.39■□□□□ 0.21
RAB40A-201ENST00000304236 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
RAB40A-201ENST00000304236 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.21
RAB40A-201ENST00000304236 NTRK3Q16288 839 aa16.39■□□□□ 0.21
RAB40A-201ENST00000304236 MFSD6Q6ZSS7 791 aa16.39■□□□□ 0.21
RAB40A-201ENST00000304236 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
RAB40A-201ENST00000304236 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
RAB40A-201ENST00000304236 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
RAB40A-201ENST00000304236 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
RAB40A-201ENST00000304236 POTECB2RU33 542 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 CDC27P30260 824 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 TPM4P67936 248 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
RAB40A-201ENST00000304236 MICU3Q86XE3 530 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 TMTC2Q8N394 836 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 STAG1Q8WVM7 1258 aa16.38■□□□□ 0.21
RAB40A-201ENST00000304236 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms