RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 FSTL1Q12841 308 aa21.08■□□□□ 0.97
CCDC78-201ENST00000293889 DLK2Q6UY11 383 aa21.08■□□□□ 0.97
CCDC78-201ENST00000293889 FAM83AQ86UY5 434 aa21.08■□□□□ 0.97
CCDC78-201ENST00000293889 FAM151AQ8WW52 585 aa21.08■□□□□ 0.97
CCDC78-201ENST00000293889 DCPSQ96C86 337 aaKnown RBP21.08■□□□□ 0.97
CCDC78-201ENST00000293889 GLIS2Q9BZE0 524 aaPredicted RBP21.08■□□□□ 0.97
CCDC78-201ENST00000293889 INCENPQ9NQS7 918 aa21.08■□□□□ 0.97
CCDC78-201ENST00000293889 PITPNM2Q9BZ72 1349 aa21.08■□□□□ 0.97
CCDC78-201ENST00000293889 DDTLA6NHG4 134 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-201ENST00000293889 FMR1Q06787 632 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC78-201ENST00000293889 KRT32Q14532 448 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 ZSCAN29Q8IWY8 852 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-201ENST00000293889 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 LAMB1P07942 1786 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 ADM5C9JUS6 153 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 TRAF5O00463 557 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 TNNI2P48788 182 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 TNFAIP1Q13829 316 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 AKNAD1Q5T1N1 836 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 KRT26Q7Z3Y9 468 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 USP48Q86UV5 1035 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 STAG1Q8WVM7 1258 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 DYNLL2Q96FJ2 89 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
CCDC78-201ENST00000293889 TMEM39BQ9GZU3 492 aa21.07■□□□□ 0.96
CCDC78-201ENST00000293889 DHX36Q9H2U1 1008 aaKnown RBP21.07■□□□□ 0.96
CCDC78-201ENST00000293889 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-201ENST00000293889 ATRNL1Q5VV63 1379 aa21.06■□□□□ 0.96
CCDC78-201ENST00000293889 COL9A3Q14050 684 aaPredicted RBP21.06■□□□□ 0.96
CCDC78-201ENST00000293889 RASA3Q14644 834 aa21.06■□□□□ 0.96
CCDC78-201ENST00000293889 APOBEC3FQ8IUX4 373 aaKnown RBP21.06■□□□□ 0.96
CCDC78-201ENST00000293889 ROBO3Q96MS0 1386 aa21.06■□□□□ 0.96
CCDC78-201ENST00000293889 HLA-DOAP06340 250 aa21.05■□□□□ 0.96
CCDC78-201ENST00000293889 SLC3A2P08195 630 aaKnown RBP21.05■□□□□ 0.96
CCDC78-201ENST00000293889 MFSD6Q6ZSS7 791 aa21.05■□□□□ 0.96
CCDC78-201ENST00000293889 CDC37L1Q7L3B6 337 aa21.05■□□□□ 0.96
CCDC78-201ENST00000293889 FGRP09769 529 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 PSMA5P28066 241 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 SULF1Q8IWU6 871 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 CDAN1Q8IWY9 1227 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 NEK1Q96PY6 1258 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 DEFB129Q9H1M3 183 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 RNF41Q9H4P4 317 aaPredicted RBP21.04■□□□□ 0.96
CCDC78-201ENST00000293889 PI4KBQ9UBF8 816 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 NEDD4P46934 1319 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 CASTP20810 708 aaKnown RBP21.04■□□□□ 0.96
CCDC78-201ENST00000293889 GABPAQ06546 454 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 C16orf86Q6ZW13 317 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 SLC44A5Q8NCS7 719 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 NKX2-3Q8TAU0 364 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 CSRNP1Q96S65 589 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 ZSWIM6Q9HCJ5 1215 aa21.04■□□□□ 0.96
CCDC78-201ENST00000293889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
CCDC78-201ENST00000293889 PRDM1O75626 825 aa21.03■□□□□ 0.96
CCDC78-201ENST00000293889 CPA1P15085 419 aa21.03■□□□□ 0.96
CCDC78-201ENST00000293889 PDE4BQ07343 736 aa21.03■□□□□ 0.96
CCDC78-201ENST00000293889 RABEP1Q15276 862 aa21.03■□□□□ 0.96
CCDC78-201ENST00000293889 UPF3BQ9BZI7 483 aaKnown RBP21.03■□□□□ 0.96
CCDC78-201ENST00000293889 EHD4Q9H223 541 aa21.03■□□□□ 0.96
CCDC78-201ENST00000293889 DAXXQ9UER7 740 aaPredicted RBP21.03■□□□□ 0.96
CCDC78-201ENST00000293889 SERPINB13Q9UIV8 391 aa21.03■□□□□ 0.96
CCDC78-201ENST00000293889 SLURP2P0DP57 97 aa21.02■□□□□ 0.96
CCDC78-201ENST00000293889 PCP11498 1178 aaKnown RBP21.02■□□□□ 0.96
CCDC78-201ENST00000293889 CDK8P49336 464 aa21.02■□□□□ 0.96
CCDC78-201ENST00000293889 TRDNQ13061 729 aa21.02■□□□□ 0.96
CCDC78-201ENST00000293889 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.96
CCDC78-201ENST00000293889 NCOA7Q8NI08 942 aa21.02■□□□□ 0.96
CCDC78-201ENST00000293889 TEPSINQ96N21 525 aa21.02■□□□□ 0.96
CCDC78-201ENST00000293889 CNNM2Q9H8M5 875 aa21.02■□□□□ 0.96
CCDC78-201ENST00000293889 SIPA1L1O43166 1804 aa21.02■□□□□ 0.95
CCDC78-201ENST00000293889 B4E1Z4 1266 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 ORC4O43929 436 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 PRAMEF18Q5VWM3 479 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 BLOC1S2Q6QNY1 142 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 RALYLQ86SE5 291 aaKnown RBP21.01■□□□□ 0.95
CCDC78-201ENST00000293889 FOXP4Q8IVH2 680 aaPredicted RBP21.01■□□□□ 0.95
CCDC78-201ENST00000293889 MB21D2Q8IYB1 491 aaPredicted RBP21.01■□□□□ 0.95
CCDC78-201ENST00000293889 KRT23Q9C075 422 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 TOMM22Q9NS69 142 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 CYP46A1Q9Y6A2 500 aa21.01■□□□□ 0.95
CCDC78-201ENST00000293889 HMGB1P09429 215 aaKnown RBP21■□□□□ 0.95
CCDC78-201ENST00000293889 RUFY3Q7L099 469 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 METTL16Q86W50 562 aaKnown RBP21■□□□□ 0.95
CCDC78-201ENST00000293889 MKNK2Q9HBH9 465 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 KDM4AO75164 1064 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 RPS6KB1P23443 525 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 NEK4P51957 841 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 CRACR2BQ8N4Y2 399 aaPredicted RBP21■□□□□ 0.95
CCDC78-201ENST00000293889 CDCA5Q96FF9 252 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 DNAJC18Q9H819 358 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 PPP2R3BQ9Y5P8 575 aa21■□□□□ 0.95
CCDC78-201ENST00000293889 FAM196BA6NMK8 535 aa20.99■□□□□ 0.95
CCDC78-201ENST00000293889 EXOSC10Q01780 885 aaKnown RBP20.99■□□□□ 0.95
CCDC78-201ENST00000293889 CYB5R4Q7L1T6 521 aa20.99■□□□□ 0.95
CCDC78-201ENST00000293889 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
CCDC78-201ENST00000293889 ZNF287Q9HBT7 754 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms