RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 TGFB3P10600 412 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 ATICP31939 592 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 FAM47EQ6ZV65 393 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 TMCO5AQ8N6Q1 288 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
PDCD4-201ENST00000280154 COL4A5P29400 1685 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 TRIM64CA6NLI5 447 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 CHAF1AQ13111 956 aaPredicted RBP10.97□□□□□ -0.65
PDCD4-201ENST00000280154 SEPT2Q15019 361 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 TMEM110Q86TL2 294 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 MPP4Q96JB8 637 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 MROH5Q6ZUA9 1318 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 SASH1O94885 1247 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 SH3BGRP55822 239 aaPredicted RBP10.97□□□□□ -0.65
PDCD4-201ENST00000280154 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
PDCD4-201ENST00000280154 DZIP1Q86YF9 867 aaKnown RBP10.97□□□□□ -0.65
PDCD4-201ENST00000280154 MYLK4Q86YV6 388 aaPredicted RBP10.97□□□□□ -0.65
PDCD4-201ENST00000280154 CCDC85CA6NKD9 419 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 BOLA2-SMG1P6H3BVE0 249 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 IFT88Q13099 833 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 SNRKQ9NRH2 765 aa10.97□□□□□ -0.65
PDCD4-201ENST00000280154 CTAGE5O15320 804 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 MGARPQ8TDB4 240 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 SLC7A5P2Q9GIP4 190 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 ALDH8A1Q9H2A2 487 aaPredicted RBP10.96□□□□□ -0.65
PDCD4-201ENST00000280154 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.65
PDCD4-201ENST00000280154 INMTO95050 263 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 NPR1P16066 1061 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 GRAPQ13588 217 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 CCDC152Q4G0S7 254 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 SMIM5Q71RC9 77 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.65
PDCD4-201ENST00000280154 GRAPLQ8TC17 118 aaPredicted RBP10.96□□□□□ -0.65
PDCD4-201ENST00000280154 PDGFDQ9GZP0 370 aaPredicted RBP10.96□□□□□ -0.65
PDCD4-201ENST00000280154 WDR90Q96KV7 1748 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 TCEAL1Q15170 157 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 SHQ1Q6PI26 577 aaKnown RBP10.96□□□□□ -0.66
PDCD4-201ENST00000280154 SYNE4Q8N205 404 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 LARGE2Q8N3Y3 721 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 CNBD1Q8NA66 436 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 UBXN4Q92575 508 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 FAM89AQ96GI7 184 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 TRMT112Q9UI30 125 aaKnown RBP10.96□□□□□ -0.66
PDCD4-201ENST00000280154 SCN9AQ15858 1988 aa10.96□□□□□ -0.66
PDCD4-201ENST00000280154 S100BP04271 92 aaPredicted RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 FAM200BP0CF97 657 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 BEGAINQ9BUH8 593 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 GREM2Q9H772 168 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 C9orf78Q9NZ63 289 aaPredicted RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 TFIP11Q9UBB9 837 aaKnown RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 N6AMT1Q9Y5N5 214 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 EYA2O00167 538 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 KIF5CO60282 957 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 IL15P40933 162 aaPredicted RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 IL17RAQ96F46 866 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 R3HCC1Q9Y3T6 440 aaKnown RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 MED23Q9ULK4 1368 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 BBOX1O75936 387 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 MMP10P09238 476 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 ST5P78524 1137 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 IPCEF1Q8WWN9 437 aaPredicted RBP10.95□□□□□ -0.66
PDCD4-201ENST00000280154 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 CHST12Q9NRB3 414 aa10.95□□□□□ -0.66
PDCD4-201ENST00000280154 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
PDCD4-201ENST00000280154 COQ9O75208 318 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 COL1A1P02452 1464 aaPredicted RBP10.94□□□□□ -0.66
PDCD4-201ENST00000280154 SLC4A10Q6U841 1118 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 SP8Q8IXZ3 490 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 THOC1Q96FV9 657 aaKnown RBP10.94□□□□□ -0.66
PDCD4-201ENST00000280154 CCDC66A2RUB6 948 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 SETSIPP0DME0 302 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 POLR2FP61218 127 aaKnown RBP10.94□□□□□ -0.66
PDCD4-201ENST00000280154 LMBR1LQ6UX01 489 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 TTC41PQ6P2S7 1318 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 ARMC9Q7Z3E5 817 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 MASTLQ96GX5 879 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 DONSONQ9NYP3 566 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.94□□□□□ -0.66
PDCD4-201ENST00000280154 MRFAP1Q9Y605 127 aa10.94□□□□□ -0.66
PDCD4-201ENST00000280154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
PDCD4-201ENST00000280154 PDE4AP27815 886 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 CCDC144BQ3MJ40 725 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 KLHL23Q8NBE8 558 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 YIPF2Q9BWQ6 316 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 TMEM63CQ9P1W3 806 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 TMCC3Q9ULS5 477 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
PDCD4-201ENST00000280154 ITGA6P23229 1130 aa10.93□□□□□ -0.66
PDCD4-201ENST00000280154 TRIM6Q9C030 488 aaPredicted RBP10.93□□□□□ -0.66
PDCD4-201ENST00000280154 TMA7Q9Y2S6 64 aaKnown RBP10.93□□□□□ -0.66
PDCD4-201ENST00000280154 PARP3Q9Y6F1 533 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms