RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 TTC21AQ8NDW8 1320 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 METP08581 1390 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 CCNYL3P0C7X3 344 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 MTX1Q13505 466 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 PKP1Q13835 747 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 POTEHQ6S545 545 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 APBA2Q99767 749 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 TM6SF1Q9BZW5 370 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 SPG7Q9UQ90 795 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 ATP8A1Q9Y2Q0 1164 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 ADAMTSL3P82987 1691 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 TSPAN6O43657 245 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 TPM3P06753 285 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 ARSHQ5FYA8 562 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 NBPF14Q5TI25 921 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 FAM169BQ8N8A8 192 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 TMX3Q96JJ7 454 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 KCNK17Q96T54 332 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 PRDM9Q9NQV7 894 aa7.28□□□□□ -1.24
CDKAL1-201ENST00000274695 ARAP2Q8WZ64 1704 aa7.27□□□□□ -1.24
CDKAL1-201ENST00000274695 NOS2P35228 1153 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 GPKOWQ92917 476 aaPredicted RBP eCLIP7.27□□□□□ -1.253e-16■□□□□ 9.7
CDKAL1-201ENST00000274695 RAD50Q92878 1312 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 ALDH1L1O75891 902 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 ZSCAN20P17040 1043 aaPredicted RBP7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 ERFEQ4G0M1 354 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 C14orf80Q86SX3 495 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 TRPM4Q8TD43 1214 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 ZBED2Q9BTP6 218 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 C2orf49Q9BVC5 232 aaPredicted RBP7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 ST7Q9NRC1 585 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 GEMIN8Q9NWZ8 242 aaKnown RBP7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 SERTAD1Q9UHV2 236 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 COL18A1P39060 1754 aa7.27□□□□□ -1.25
CDKAL1-201ENST00000274695 HOXB7P09629 217 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 HOXB3P14651 431 aaPredicted RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 USP5P45974 858 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 PTCRAQ6ISU1 281 aaPredicted RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 PODNQ7Z5L7 613 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 HOMER1Q86YM7 354 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 FEZ1Q99689 392 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 GTPBP4Q9BZE4 634 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 PCDH10Q9P2E7 1040 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 NSFL1CQ9UNZ2 370 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 USP17L7P0C7H9 530 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 MSNP26038 577 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 CHMLP26374 656 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 CDC25BP30305 580 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 SSH3Q8TE77 659 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 NUDT12Q9BQG2 462 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 CD2APQ9Y5K6 639 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 RAB15P59190 212 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 TTF1Q15361 905 aaPredicted RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 KIAA0825Q8IV33 1275 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 ZGPATQ8N5A5 531 aaKnown RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 ARNT2Q9HBZ2 717 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 COMMD10Q9Y6G5 202 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 UTYO14607 1347 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 FLT4P35916 1363 aa7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 NPHP4O75161 1426 aaPredicted RBP7.26□□□□□ -1.25
CDKAL1-201ENST00000274695 NWD2Q9ULI1 1742 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 KCNQ2O43526 872 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 SH3PXD2AQ5TCZ1 1133 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 TTC39BQ5VTQ0 682 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CCSAPQ6IQ19 270 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CASC1Q6TDU7 716 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 PI4K2BQ8TCG2 481 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 SYAP1Q96A49 352 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CEP89Q96ST8 783 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CABP1Q9NZU7 370 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 WDR33Q9C0J8 1336 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 ATP8B2P98198 1209 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CCDC183Q5T5S1 534 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CCDC81Q6ZN84 652 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 C16orf86Q6ZW13 317 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 TSPY26PQ9H489 355 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 USP3Q9Y6I4 520 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 AFDNP55196 1824 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 MYH7P12883 1935 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 TMEM2Q9UHN6 1383 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 SHTN1A0MZ66 631 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 ACTN4O43707 911 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 KIF20AO95235 890 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 SCGB1D2O95969 90 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 MX1P20591 662 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 C10orf62Q5T681 223 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 CAVIN1Q6NZI2 390 aaKnown RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 KRBA2Q6ZNG9 492 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 KIAA1524Q8TCG1 905 aa7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 BSDC1Q9NW68 430 aaPredicted RBP7.25□□□□□ -1.25
CDKAL1-201ENST00000274695 KAT6BQ8WYB5 2073 aa7.24□□□□□ -1.25
CDKAL1-201ENST00000274695 CICQ96RK0 1608 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms