RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 MAP1SQ66K74 1059 aaPredicted RBP20.45■□□□□ 0.86
SKP2-201ENST00000274254 USP48Q86UV5 1035 aa20.45■□□□□ 0.86
SKP2-201ENST00000274254 TBC1D10CQ8IV04 446 aa20.45■□□□□ 0.86
SKP2-201ENST00000274254 FOXP4Q8IVH2 680 aaPredicted RBP20.45■□□□□ 0.86
SKP2-201ENST00000274254 RASEFQ8IZ41 740 aa20.45■□□□□ 0.86
SKP2-201ENST00000274254 SERPINB13Q9UIV8 391 aa20.45■□□□□ 0.86
SKP2-201ENST00000274254 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
SKP2-201ENST00000274254 TAF6LQ9Y6J9 622 aa20.45■□□□□ 0.86
SKP2-201ENST00000274254 FGRP09769 529 aa20.44■□□□□ 0.86
SKP2-201ENST00000274254 MCCP23508 829 aa20.44■□□□□ 0.86
SKP2-201ENST00000274254 MAP3K10Q02779 954 aa20.44■□□□□ 0.86
SKP2-201ENST00000274254 CTDSPL2Q05D32 466 aa20.44■□□□□ 0.86
SKP2-201ENST00000274254 NBPF12Q5TAG4 269 aaPredicted RBP20.44■□□□□ 0.86
SKP2-201ENST00000274254 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
SKP2-201ENST00000274254 ZNF784Q8NCA9 323 aaPredicted RBP20.44■□□□□ 0.86
SKP2-201ENST00000274254 GLIS2Q9BZE0 524 aaPredicted RBP20.44■□□□□ 0.86
SKP2-201ENST00000274254 TBC1D12O60347 775 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 C16orf86Q6ZW13 317 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 STAG1Q8WVM7 1258 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 DYNLL2Q96FJ2 89 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 C22orf23Q9BZE7 217 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 DNAJC18Q9H819 358 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 SSC5DA1L4H1 1573 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 SLC3A2P08195 630 aaKnown RBP20.43■□□□□ 0.86
SKP2-201ENST00000274254 PCP11498 1178 aaKnown RBP20.43■□□□□ 0.86
SKP2-201ENST00000274254 ZKSCAN1P17029 563 aaPredicted RBP20.43■□□□□ 0.86
SKP2-201ENST00000274254 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
SKP2-201ENST00000274254 AKNAD1Q5T1N1 836 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 CHADLQ6NUI6 762 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 HERC5Q9UII4 1024 aaKnown RBP20.43■□□□□ 0.86
SKP2-201ENST00000274254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.43■□□□□ 0.86
SKP2-201ENST00000274254 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
SKP2-201ENST00000274254 SLURP2P0DP57 97 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 SUPT20HL1Q3ZLR7 823 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 STOX1Q6ZVD7 989 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 SLC44A5Q8NCS7 719 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 HOOK2Q96ED9 719 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 IL17RAQ96F46 866 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 CDCA5Q96FF9 252 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 SWAP70Q9UH65 585 aa20.42■□□□□ 0.86
SKP2-201ENST00000274254 E7EWF7 191 aa20.41■□□□□ 0.86
SKP2-201ENST00000274254 CDK8P49336 464 aa20.41■□□□□ 0.86
SKP2-201ENST00000274254 ANAPC15P60006 121 aa20.41■□□□□ 0.86
SKP2-201ENST00000274254 STK11IPQ8N1F8 1099 aa20.41■□□□□ 0.86
SKP2-201ENST00000274254 CRACR2BQ8N4Y2 399 aaPredicted RBP20.41■□□□□ 0.86
SKP2-201ENST00000274254 RNF41Q9H4P4 317 aaPredicted RBP20.41■□□□□ 0.86
SKP2-201ENST00000274254 INCENPQ9NQS7 918 aa20.41■□□□□ 0.86
SKP2-201ENST00000274254 ORC4O43929 436 aa20.4■□□□□ 0.86
SKP2-201ENST00000274254 SHMT1P34896 483 aa20.4■□□□□ 0.86
SKP2-201ENST00000274254 PDE4BQ07343 736 aa20.4■□□□□ 0.86
SKP2-201ENST00000274254 MFSD6Q6ZSS7 791 aa20.4■□□□□ 0.86
SKP2-201ENST00000274254 MIGA2Q7L4E1 593 aa20.4■□□□□ 0.86
SKP2-201ENST00000274254 NEDD4P46934 1319 aa20.39■□□□□ 0.86
SKP2-201ENST00000274254 FAM196BA6NMK8 535 aa20.39■□□□□ 0.85
SKP2-201ENST00000274254 ITGBL1O95965 494 aaPredicted RBP20.39■□□□□ 0.85
SKP2-201ENST00000274254 KRT32Q14532 448 aa20.39■□□□□ 0.85
SKP2-201ENST00000274254 TATDN1Q6P1N9 297 aa20.39■□□□□ 0.85
SKP2-201ENST00000274254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.39■□□□□ 0.85
SKP2-201ENST00000274254 ZNF287Q9HBT7 754 aa20.39■□□□□ 0.85
SKP2-201ENST00000274254 TRAF5O00463 557 aa20.38■□□□□ 0.85
SKP2-201ENST00000274254 ADCK5Q3MIX3 580 aa20.38■□□□□ 0.85
SKP2-201ENST00000274254 DCAF15Q66K64 600 aa20.38■□□□□ 0.85
SKP2-201ENST00000274254 PRDM1O75626 825 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 RASA1P20936 1047 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 TRIM34Q9BYJ4 488 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 MKNK2Q9HBH9 465 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 MYH8P13535 1937 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 PHF20L1A8MW92 1017 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 TOMM70O94826 608 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 NT5C2P49902 561 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 NKX2-3Q8TAU0 364 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 KIF2CQ99661 725 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 KRT23Q9C075 422 aa20.37■□□□□ 0.85
SKP2-201ENST00000274254 NF2P35240 595 aa20.36■□□□□ 0.85
SKP2-201ENST00000274254 FMR1Q06787 632 aaKnown RBP eCLIP20.36■□□□□ 0.85
SKP2-201ENST00000274254 TRDNQ13061 729 aa20.36■□□□□ 0.85
SKP2-201ENST00000274254 COL9A3Q14050 684 aaPredicted RBP20.36■□□□□ 0.85
SKP2-201ENST00000274254 SMC1BQ8NDV3 1235 aa20.36■□□□□ 0.85
SKP2-201ENST00000274254 NCOA7Q8NI08 942 aa20.36■□□□□ 0.85
SKP2-201ENST00000274254 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
SKP2-201ENST00000274254 ZNF341Q9BYN7 854 aa20.36■□□□□ 0.85
SKP2-201ENST00000274254 ZNF112Q9UJU3 913 aa20.36■□□□□ 0.85
SKP2-201ENST00000274254 B4E1Z4 1266 aa20.35■□□□□ 0.85
SKP2-201ENST00000274254 RRP1BQ14684 758 aaKnown RBP20.35■□□□□ 0.85
SKP2-201ENST00000274254 MB21D2Q8IYB1 491 aaPredicted RBP20.35■□□□□ 0.85
SKP2-201ENST00000274254 ZNF444Q8N0Y2 327 aaPredicted RBP20.35■□□□□ 0.85
SKP2-201ENST00000274254 NEK1Q96PY6 1258 aa20.35■□□□□ 0.85
SKP2-201ENST00000274254 TM6SF1Q9BZW5 370 aa20.35■□□□□ 0.85
SKP2-201ENST00000274254 TOMM22Q9NS69 142 aa20.35■□□□□ 0.85
SKP2-201ENST00000274254 USP2O75604 605 aaPredicted RBP20.34■□□□□ 0.85
SKP2-201ENST00000274254 CERKLQ49MI3 558 aaPredicted RBP20.34■□□□□ 0.85
SKP2-201ENST00000274254 RRP12Q5JTH9 1297 aaKnown RBP20.34■□□□□ 0.85
SKP2-201ENST00000274254 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
SKP2-201ENST00000274254 ESR2Q92731 530 aa20.34■□□□□ 0.85
SKP2-201ENST00000274254 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
SKP2-201ENST00000274254 CCDC17Q96LX7 622 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms