RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 EPB41L4AQ9HCS5 686 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 ABCF2Q9UG63 623 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 ZNF215Q9UL58 517 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 MAGEB6P1A0A0J9YX57 407 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 CALM1P0DP23 149 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 CALM2P0DP24 149 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 CALM3P0DP25 149 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 EIF5P55010 431 aaKnown RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 PPARAQ07869 468 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 E4F1Q66K89 784 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 CATIPQ7Z7H3 387 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 ZNF654Q8IZM8 581 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 RNF26Q9BY78 433 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 SENP2Q9HC62 589 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 PCP11498 1178 aaKnown RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 ZKSCAN3Q9BRR0 538 aa9.4□□□□□ -0.9
NEDD1-201ENST00000266742 NIP7Q9Y221 180 aaKnown RBP eCLIP9.4□□□□□ -0.9
NEDD1-201ENST00000266742 NWD2Q9ULI1 1742 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.91
NEDD1-201ENST00000266742 ARHGAP6O43182 974 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 ATP2B1P20020 1258 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 BCAMP50895 628 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 SYT10Q6XYQ8 523 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 NUTM2AQ8IVF1 878 aaPredicted RBP9.4□□□□□ -0.91
NEDD1-201ENST00000266742 VSTM4Q8IW00 320 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 LCORLQ8N3X6 602 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 MNS1Q8NEH6 495 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 RBM28Q9NW13 759 aaKnown RBP9.4□□□□□ -0.91
NEDD1-201ENST00000266742 FANCLQ9NW38 375 aa9.4□□□□□ -0.91
NEDD1-201ENST00000266742 ARGLU1Q9NWB6 273 aaPredicted RBP9.4□□□□□ -0.91
NEDD1-201ENST00000266742 NID2Q14112 1375 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 TRIM75PA6NK02 468 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 ATP1A3P13637 1013 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
NEDD1-201ENST00000266742 UTP14CQ5TAP6 766 aaKnown RBP9.39□□□□□ -0.91
NEDD1-201ENST00000266742 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
NEDD1-201ENST00000266742 MIGA1Q8NAN2 632 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 SLC4A9Q96Q91 983 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 KCNJ14Q9UNX9 436 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
NEDD1-201ENST00000266742 TPM1P09493 284 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 PDILTQ8N807 584 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
NEDD1-201ENST00000266742 PKNOX2Q96KN3 472 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 INCENPQ9NQS7 918 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 PRKAB2O43741 272 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 CHRNDQ07001 517 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 STK11IPQ8N1F8 1099 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 PYM1Q9BRP8 204 aaKnown RBP9.39□□□□□ -0.91
NEDD1-201ENST00000266742 CABP5Q9NP86 173 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 SEC31BQ9NQW1 1179 aa9.39□□□□□ -0.91
NEDD1-201ENST00000266742 GTF2E1P29083 439 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-201ENST00000266742 KRT2P35908 639 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 IFIT1BQ5T764 474 aaKnown RBP9.38□□□□□ -0.91
NEDD1-201ENST00000266742 MYH7P12883 1935 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 PHLPP2Q6ZVD8 1323 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 ZNF335Q9H4Z2 1342 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-201ENST00000266742 ERCC5P28715 1186 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-201ENST00000266742 DDB1Q16531 1140 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 FILIP1LQ4L180 1135 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 UBXN4Q92575 508 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 FERMT2Q96AC1 680 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 DNAI1Q9UI46 699 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 FBXO2Q9UK22 296 aaPredicted RBP9.38□□□□□ -0.91
NEDD1-201ENST00000266742 NFE2L3Q9Y4A8 694 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 CRKLP46109 303 aaKnown RBP9.38□□□□□ -0.91
NEDD1-201ENST00000266742 SPECC1LQ69YQ0 1117 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 ANAPC4Q9UJX5 808 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 MAN1B1Q9UKM7 699 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 TNKSO95271 1327 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 LRP6O75581 1613 aa9.38□□□□□ -0.91
NEDD1-201ENST00000266742 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 SPECC1Q5M775 1068 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 KRT222Q8N1A0 295 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 CTAGE1Q96RT6 745 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 BAG1Q99933 345 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 STX10O60499 249 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 DMTNQ08495 405 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 DDX41Q9UJV9 622 aaKnown RBP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 GUCY1A2P33402 732 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 ELF2Q15723 593 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 NT5DC1Q5TFE4 455 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 ANKRD20A12PQ8NF67 263 aa9.37□□□□□ -0.91
NEDD1-201ENST00000266742 BCL11BQ9C0K0 894 aaPredicted RBP9.37□□□□□ -0.91
NEDD1-201ENST00000266742 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 SIK1P57059 783 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms