RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.25
PDLIM2-201ENST00000265810 TICAM2Q86XR7 235 aa16.58■□□□□ 0.25
PDLIM2-201ENST00000265810 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.25
PDLIM2-201ENST00000265810 COL23A1Q86Y22 540 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 USP17L3A6NCW0 530 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 USP17L4A6NCW7 530 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 MCM7P33993 719 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 LTN1O94822 1766 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 NWD1Q149M9 1564 aa16.58■□□□□ 0.24
PDLIM2-201ENST00000265810 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 CRAMP1Q96RY5 1269 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 CALML4Q96GE6 196 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 GPR162Q16538 588 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 VPS54Q9P1Q0 977 aa16.57■□□□□ 0.24
PDLIM2-201ENST00000265810 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 PAXIP1Q6ZW49 1069 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 PCP11498 1178 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 APOA5Q6Q788 366 aa16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 TBC1D16Q8TBP0 767 aa16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 LARGE1O95461 756 aa16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 ZNF174Q15697 407 aa16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
PDLIM2-201ENST00000265810 SPDYE3A6NKU9 549 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 AOC3Q16853 763 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 CERKLQ49MI3 558 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 INCENPQ9NQS7 918 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 IDEP14735 1019 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 RILPL1Q5EBL4 403 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 FILIP1Q7Z7B0 1213 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 LRRC47Q8N1G4 583 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 GOLGA8HP0CJ92 632 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 AFMP43652 599 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 ZNF165P49910 485 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 SH3RF3Q8TEJ3 882 aaPredicted RBP16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 ZMYM6O95789 1325 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
PDLIM2-201ENST00000265810 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 PLS1Q14651 629 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 CHAMP1Q96JM3 812 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 R3HDM1Q15032 1099 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 CUL4AQ13619 759 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 LETM2Q2VYF4 491 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 ANO1Q5XXA6 986 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 ATL3Q6DD88 541 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
PDLIM2-201ENST00000265810 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 MRPL12P52815 198 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 TANGO6Q9C0B7 1094 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 IL25Q9H293 177 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 USP25Q9UHP3 1055 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 ATP6V0A2Q9Y487 856 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 LRSAM1Q6UWE0 723 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 ECE2O60344 883 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 CACNB3P54284 484 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 KANK3Q6NY19 840 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 TBC1D10CQ8IV04 446 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 CSRNP1Q96S65 589 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 CYP2D6P10635 497 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 STX1AQ16623 288 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 DHX58Q96C10 678 aa16.53■□□□□ 0.24
PDLIM2-201ENST00000265810 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 ZNF277Q9NRM2 450 aaPredicted RBP16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 KLRF2D3W0D1 207 aa16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 LZTS2Q9BRK4 669 aa16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
PDLIM2-201ENST00000265810 KRI1Q8N9T8 703 aaKnown RBP16.52■□□□□ 0.23
PDLIM2-201ENST00000265810 LEO1Q8WVC0 666 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-201ENST00000265810 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-201ENST00000265810 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.23
PDLIM2-201ENST00000265810 OFD1O75665 1012 aa16.52■□□□□ 0.23
PDLIM2-201ENST00000265810 SH2B2O14492 632 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-201ENST00000265810 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms