RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 TFCP2Q12800 502 aa10.57□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PAG1Q9NWQ8 432 aa10.57□□□□□ -0.72
RAB3GAP1-201ENST00000264158 METP08581 1390 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 U2AF2P26368 475 aaKnown RBP eCLIP10.56□□□□□ -0.725e-7■■■■□ 20.2
RAB3GAP1-201ENST00000264158 LMAN1P49257 510 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CALML4Q96GE6 196 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 A0A1B0GVL5 298 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ALAS1P13196 640 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CDC37L1Q7L3B6 337 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 RIMBP3CA6NJZ7 1639 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 RIMBP3BA6NNM3 1639 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 RIMBP3Q9UFD9 1639 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 USP14P54578 494 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PDE4DQ08499 809 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 Q3C1V9 767 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 TGFBRAP1Q8WUH2 860 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PIGBQ92521 554 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 A2ML1A8K2U0 1454 aa10.56□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 SIRT2Q8IXJ6 389 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 KLHDC4Q8TBB5 520 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 LEO1Q8WVC0 666 aaPredicted RBP10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 METTL22Q9BUU2 404 aaPredicted RBP10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CLSTN2Q9H4D0 955 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.726e-7■■■□□ 15.4
RAB3GAP1-201ENST00000264158 OGFRQ9NZT2 677 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 SHROOM2Q13796 1616 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PABPN1LA6NDY0 278 aaKnown RBP10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ZNF75DP51815 510 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 SPA17Q15506 151 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CNNM2Q9H8M5 875 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ZBTB43O43298 467 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 YEATS4O95619 227 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CALML3P27482 149 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MAP9Q49MG5 647 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 KIAA1841Q6NSI8 718 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 TIGD1Q96MW7 591 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ARAP3Q8WWN8 1544 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 GNPTABQ3T906 1256 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 TXLNBQ8N3L3 684 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ARFGAP3Q9NP61 516 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 LEMD3Q9Y2U8 911 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 COMMD10Q9Y6G5 202 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 OVOS2A0A0G2JMS6 1433 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 OVOS2A0A0J9YW53 1432 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 OVOS2Q6IE36 1432 aa10.55□□□□□ -0.72
RAB3GAP1-201ENST00000264158 KMT5BQ4FZB7 885 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 LPIN2Q92539 896 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MYO6Q9UM54 1294 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ZNF804BA4D1E1 1349 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PARP1P09874 1014 aaKnown RBP10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 EYA2O00167 538 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 DPEP1P16444 411 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 AFMP43652 599 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 FHDC1Q9C0D6 1143 aaPredicted RBP10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 USP44Q9H0E7 712 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 N4BP3O15049 544 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ME3Q16798 604 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 KANK3Q6NY19 840 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 USP37Q86T82 979 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 GTF3C6Q969F1 213 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 IMPG2Q9BZV3 1241 aa10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
RAB3GAP1-201ENST00000264158 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 AOC3Q16853 763 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PSMD1Q99460 953 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 HARSP12081 509 aaKnown RBP10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MCM6Q14566 821 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CERKLQ49MI3 558 aaPredicted RBP10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ZBTB9Q96C00 473 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 TSG101Q99816 390 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MROH5Q6ZUA9 1318 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 JAK2O60674 1132 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 CFBP00751 764 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 NCOA5Q9HCD5 579 aaKnown RBP10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 RNF113AO15541 343 aaKnown RBP10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 DKC1O60832 514 aaKnown RBP eCLIP10.53□□□□□ -0.722e-25■■■■■ 27.4
RAB3GAP1-201ENST00000264158 DNA2P51530 1060 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 PPM1EQ8WY54 764 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 HINFPQ9BQA5 517 aa10.53□□□□□ -0.72
RAB3GAP1-201ENST00000264158 MAP3K15Q6ZN16 1313 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms