RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ME1P48163 572 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 EZH2Q15910 746 aaKnown RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 HSP90AA4PQ58FG1 418 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 TTC22Q5TAA0 569 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 LRRC31Q6UY01 552 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 CNBD1Q8NA66 436 aa9.47□□□□□ -0.89
LDB3-201ENST00000263066 CDCA7Q9BWT1 371 aaPredicted RBP9.47□□□□□ -0.89
LDB3-201ENST00000263066 ECEL1O95672 775 aa9.46□□□□□ -0.89
LDB3-201ENST00000263066 TUBB4AP04350 444 aa9.46□□□□□ -0.89
LDB3-201ENST00000263066 CAPRIN2Q6IMN6 1127 aaKnown RBP9.46□□□□□ -0.89
LDB3-201ENST00000263066 PNMA8AQ86V59 439 aaPredicted RBP9.46□□□□□ -0.89
LDB3-201ENST00000263066 SCAND2PQ9GZW5 306 aaPredicted RBP9.46□□□□□ -0.89
LDB3-201ENST00000263066 CTAGE15A4D2H0 777 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 KLHL33A6NCF5 533 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 CTAGE8P0CG41 777 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
LDB3-201ENST00000263066 ADCY2Q08462 1091 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 HLFQ16534 295 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 HHATQ5VTY9 493 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 CTAGE6Q86UF2 777 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 CTAGE4Q8IX94 777 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 ANAPC4Q9UJX5 808 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 A0A087WWV3 80 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 ANKRD18BA2A2Z9 1011 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 TXNRD1Q16881 649 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 INF2Q27J81 1249 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 FKBP15Q5T1M5 1219 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 REXO1L1PQ8IX06 675 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 KLHL23Q8NBE8 558 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 CCDC148Q8NFR7 591 aa9.46□□□□□ -0.9
LDB3-201ENST00000263066 CCDC151A5D8V7 595 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 PDCP20941 246 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 ABCD1P33897 745 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 TXLNAP40222 546 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 SF3A3Q12874 501 aaKnown RBP eCLIP9.45□□□□□ -0.9
LDB3-201ENST00000263066 ODF2Q5BJF6 829 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 SPECC1Q5M775 1068 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 MYLK4Q86YV6 388 aaPredicted RBP9.45□□□□□ -0.9
LDB3-201ENST00000263066 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
LDB3-201ENST00000263066 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
LDB3-201ENST00000263066 DIP2AQ14689 1571 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 MYBL1P10243 752 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 RABGGTAQ92696 567 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
LDB3-201ENST00000263066 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
LDB3-201ENST00000263066 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 IFT88Q13099 833 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 CCDC26Q8TAB7 109 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 CPLX3Q8WVH0 158 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 CAPS2Q9BXY5 557 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 KLC4Q9NSK0 619 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 BSDC1Q9NW68 430 aaPredicted RBP9.44□□□□□ -0.9
LDB3-201ENST00000263066 PALLDQ8WX93 1383 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 PTCH1Q13635 1447 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
LDB3-201ENST00000263066 SUGCTQ9HAC7 445 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 VIRMAQ69YN4 1812 aaKnown RBP9.44□□□□□ -0.9
LDB3-201ENST00000263066 ANKARQ7Z5J8 1434 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 ZNF521Q96K83 1311 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 TADA3O75528 432 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 KIF5BP33176 963 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 CASP8Q14790 479 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 GPR162Q16538 588 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 CCDC40Q4G0X9 1142 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 RNF168Q8IYW5 571 aaPredicted RBP9.44□□□□□ -0.9
LDB3-201ENST00000263066 NECAB1Q8N987 351 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 OTUD7AQ8TE49 926 aaPredicted RBP9.44□□□□□ -0.9
LDB3-201ENST00000263066 TSC22D3Q99576 134 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 BAG1Q99933 345 aaPredicted RBP9.44□□□□□ -0.9
LDB3-201ENST00000263066 HINFPQ9BQA5 517 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.44□□□□□ -0.9
LDB3-201ENST00000263066 LIMCH1Q9UPQ0 1083 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 LRRC7Q96NW7 1537 aa9.44□□□□□ -0.9
LDB3-201ENST00000263066 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 MMP10P09238 476 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 CA8P35219 290 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 ATP1A2P50993 1020 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 STIM1Q13586 685 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 LAMB3Q13751 1172 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 ALDH1L2Q3SY69 923 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 TRIM68Q6AZZ1 485 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 CCDC50Q8IVM0 306 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 FAM114A1Q8IWE2 563 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 LINS1Q8NG48 757 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 FBXO41Q8TF61 875 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 ZRANB2O95218 330 aaKnown RBP eCLIP9.43□□□□□ -0.9
LDB3-201ENST00000263066 ZKSCAN1P17029 563 aaPredicted RBP9.43□□□□□ -0.9
LDB3-201ENST00000263066 TPP2P29144 1249 aaPredicted RBP9.43□□□□□ -0.9
LDB3-201ENST00000263066 KCNB1Q14721 858 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 WHAMMP3Q1A5X7 153 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 NYAP1Q6ZVC0 841 aa9.43□□□□□ -0.9
LDB3-201ENST00000263066 CPSF1Q10570 1443 aaKnown RBP9.43□□□□□ -0.9
LDB3-201ENST00000263066 SLC8A1P32418 973 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms