RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 LINC00116Q8NCU8 138 aa12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 BSDC1Q9NW68 430 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-201ENST00000261007 GOLGA6L9A6NEM1 432 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 CBFA2T2O43439 604 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 KCNQ2O43526 872 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 KRT23Q9C075 422 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 NAPBQ9H115 298 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 WWC3Q9ULE0 1092 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 PCDHA7Q9UN72 937 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 ZNF804BA4D1E1 1349 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 A0A0G2JLW4 131 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 SEMA3EO15041 775 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 TBC1D8O95759 1140 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 JAKMIP3Q5VZ66 844 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 C8orf37Q96NL8 207 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 NARFQ9UHQ1 456 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
CHRNA1-201ENST00000261007 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 YEATS4O95619 227 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 ANTXR2P58335 489 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 NCAPHQ15003 741 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 DPCR1Q3MIW9 517 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 CAVIN4Q5BKX8 364 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 BRAPQ7Z569 592 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 REXO1L1PQ8IX06 675 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 KCNG4Q8TDN1 519 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 RNF41Q9H4P4 317 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 A0A1B0GUL6 1792 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 PDS5AQ29RF7 1337 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 POLR3GO15318 223 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 URI1O94763 535 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 OAS2P29728 719 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 LIFRP42702 1097 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 FANCCQ00597 558 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 CHST3Q7LGC8 479 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 GOLGA5Q8TBA6 731 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 C8orf76Q96K31 380 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 CARD6Q9BX69 1037 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 RASSF4Q9H2L5 321 aa12.38□□□□□ -0.43
CHRNA1-201ENST00000261007 BTAF1O14981 1849 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 MBD4O95243 580 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 TBC1D10CQ8IV04 446 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 LINC00301Q8NCQ3 95 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 NEK11Q8NG66 645 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 ARFGAP3Q9NP61 516 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 LRP2BPQ9P2M1 347 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 DENND2AQ9ULE3 1009 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 CHD4Q14839 1912 aa12.37□□□□□ -0.43
CHRNA1-201ENST00000261007 A0A087WWV3 80 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 ZPR1O75312 459 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 BCAMP50895 628 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 NDUFA8P51970 172 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 RCAN1P53805 252 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 SART3Q15020 963 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 RABGGTAQ92696 567 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 NLRP3Q96P20 1036 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 HPS5Q9UPZ3 1129 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 NEDD4P46934 1319 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 C4BP0C0L5 1744 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 ARHGAP6O43182 974 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 SASH3O75995 380 aa12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
CHRNA1-201ENST00000261007 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms