RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 RIOK1Q9BRS2 568 aaKnown RBP20.62■□□□□ 0.89
SSB-201ENST00000260956 FTOQ9C0B1 505 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSB-201ENST00000260956 FAM217BQ9NTX9 383 aaPredicted RBP20.62■□□□□ 0.89
SSB-201ENST00000260956 NTRK3Q16288 839 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 FBXO18Q8NFZ0 1043 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 ANP32BQ92688 251 aaKnown RBP20.61■□□□□ 0.89
SSB-201ENST00000260956 NAPBQ9H115 298 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 CLSTN2Q9H4D0 955 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 GPBP1L1Q9HC44 474 aaPredicted RBP20.61■□□□□ 0.89
SSB-201ENST00000260956 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 DDX19AQ9NUU7 478 aaKnown RBP20.61■□□□□ 0.89
SSB-201ENST00000260956 DHX16O60231 1041 aaKnown RBP20.61■□□□□ 0.89
SSB-201ENST00000260956 PPFIA3O75145 1194 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 APPP05067 770 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 LIFRP42702 1097 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 TRDNQ13061 729 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 AKNAD1Q5T1N1 836 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 DPY19L2Q6NUT2 758 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 DACT1Q9NYF0 836 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 CFAP45Q9UL16 551 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 GJA3Q9Y6H8 435 aa20.61■□□□□ 0.89
SSB-201ENST00000260956 SEMA3EO15041 775 aa20.6■□□□□ 0.89
SSB-201ENST00000260956 FOSBP53539 338 aa20.6■□□□□ 0.89
SSB-201ENST00000260956 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
SSB-201ENST00000260956 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
SSB-201ENST00000260956 GPC2Q8N158 579 aa20.6■□□□□ 0.89
SSB-201ENST00000260956 NUP62CLQ9H1M0 184 aa20.6■□□□□ 0.89
SSB-201ENST00000260956 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.6■□□□□ 0.89
SSB-201ENST00000260956 ORC3Q9UBD5 711 aaPredicted RBP20.6■□□□□ 0.89
SSB-201ENST00000260956 ANAPC4Q9UJX5 808 aa20.6■□□□□ 0.89
SSB-201ENST00000260956 NAP1L2Q9ULW6 460 aaPredicted RBP20.6■□□□□ 0.89
SSB-201ENST00000260956 PSMD14O00487 310 aa20.59■□□□□ 0.89
SSB-201ENST00000260956 CDC27P30260 824 aa20.59■□□□□ 0.89
SSB-201ENST00000260956 RAB11FIP4Q86YS3 637 aa20.59■□□□□ 0.89
SSB-201ENST00000260956 MTA3Q9BTC8 594 aa20.59■□□□□ 0.89
SSB-201ENST00000260956 CD209Q9NNX6 404 aa20.59■□□□□ 0.89
SSB-201ENST00000260956 IQSEC3Q9UPP2 1182 aaPredicted RBP20.59■□□□□ 0.89
SSB-201ENST00000260956 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
SSB-201ENST00000260956 BAZ2AQ9UIF9 1905 aaKnown RBP20.59■□□□□ 0.89
SSB-201ENST00000260956 SHTN1A0MZ66 631 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 KIF3CO14782 793 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 SCNN1DP51172 638 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 GUCY1B3Q02153 619 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 TRIM44Q96DX7 344 aaPredicted RBP20.58■□□□□ 0.89
SSB-201ENST00000260956 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
SSB-201ENST00000260956 MXD3Q9BW11 206 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 COA1Q9GZY4 146 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 ZSWIM5Q9P217 1185 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 SLC4A4Q9Y6R1 1079 aa20.58■□□□□ 0.89
SSB-201ENST00000260956 NR1I2O75469 434 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 CYP7A1P22680 504 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 CIAPIN1Q6FI81 312 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 MIGA1Q8NAN2 632 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 GNL3LQ9NVN8 582 aaKnown RBP20.58■□□□□ 0.88
SSB-201ENST00000260956 RTEL1Q9NZ71 1219 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 LRP2BPQ9P2M1 347 aa20.58■□□□□ 0.88
SSB-201ENST00000260956 RANBP6O60518 1105 aaKnown RBP20.57■□□□□ 0.88
SSB-201ENST00000260956 MAP3K11Q16584 847 aa20.57■□□□□ 0.88
SSB-201ENST00000260956 TPRNQ4KMQ1 711 aa20.57■□□□□ 0.88
SSB-201ENST00000260956 PODNQ7Z5L7 613 aa20.57■□□□□ 0.88
SSB-201ENST00000260956 ZSCAN30Q86W11 494 aa20.57■□□□□ 0.88
SSB-201ENST00000260956 C8orf76Q96K31 380 aa20.57■□□□□ 0.88
SSB-201ENST00000260956 STK36Q9NRP7 1315 aa20.57■□□□□ 0.88
SSB-201ENST00000260956 KIF28PB7ZC32 967 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 G3V3G9 751 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 KDM4AO75164 1064 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 METAP2P50579 478 aaKnown RBP eCLIP20.56■□□□□ 0.88
SSB-201ENST00000260956 KIF23Q02241 960 aaPredicted RBP20.56■□□□□ 0.88
SSB-201ENST00000260956 DCAF8Q5TAQ9 597 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 ENGASEQ8NFI3 743 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 ZNF396Q96N95 335 aaPredicted RBP20.56■□□□□ 0.88
SSB-201ENST00000260956 KRT23Q9C075 422 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 GOLPH3LQ9H4A5 285 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 GJB4Q9NTQ9 266 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 MRVI1Q9Y6F6 885 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 VIL1P09327 827 aaKnown RBP20.56■□□□□ 0.88
SSB-201ENST00000260956 EPS15P42566 896 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 GMPSP49915 693 aaPredicted RBP20.56■□□□□ 0.88
SSB-201ENST00000260956 TMEM67Q5HYA8 995 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
SSB-201ENST00000260956 FGRP09769 529 aa20.55■□□□□ 0.88
SSB-201ENST00000260956 IL1R1P14778 569 aa20.55■□□□□ 0.88
SSB-201ENST00000260956 BRAPQ7Z569 592 aa20.55■□□□□ 0.88
SSB-201ENST00000260956 NOL7Q9UMY1 257 aaKnown RBP20.55■□□□□ 0.88
SSB-201ENST00000260956 WDR90Q96KV7 1748 aa20.55■□□□□ 0.88
SSB-201ENST00000260956 MAGEB6P1A0A0J9YX57 407 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 ZBTB43O43298 467 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
SSB-201ENST00000260956 TDO2P48775 406 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 TYRO3Q06418 890 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 PPARAQ07869 468 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 SNW1Q13573 536 aaKnown RBP20.54■□□□□ 0.88
SSB-201ENST00000260956 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
SSB-201ENST00000260956 DACT2Q5SW24 774 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms